Specimen Details

ICMP 8644 – Chromobacterium violaceum Bergonzini

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 8644

Type status:

Type strain

Culture type:

Bacterial Culture

Database record added:

25 January 2002

Database record updated:

19 August 2023

Components

Primary component

Active identification

Determined name:

Chromobacterium violaceum Bergonzini 1880

Determiner:

Identification date:

Preferred name:

Chromobacterium violaceum Bergonzini

Division:

Pseudomonadota

Class:

Betaproteobacteria

Order:

Neisseriales

Family:

Neisseriaceae

Identification type:

Determination

Type status:

Type strain

Substrate:

Fresh water

Other identifications

Identification

Determined name:

Chromobacterium violaceum

Determiner:

Identification date:

Preferred name:

Chromobacterium violaceum Bergonzini

Active:

Identification type:

Received as

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Malaya

Verbatim locality:

Malaya

Verbatim collector:

P.H.A. Sneath

Standardised collector:

P. H. A. Sneath

Verbatim date:

before 1956

Start date:

1956

Country:

Malaysia

Culture flags

MPI:

Restricted Culture

Price Category:

Category 2

Culture notes

Characterised as:

Produces restriction endonuclease CviI, Serine hydroxymethyltransferase synthesis
ATCC

External links

GenBank:

PRJEB6403 - NCTC_3000

Note: as NCTC 9757

AE016825 - dnaA, dnaN, gyrB, tar, nadV, cyaY, cysE, pleD, gcvA, hemY, hemX, hemD, hemC, ppc, lasB, pdxH, hemL, pilR, pilS, parC, hemA, prfA, fadD1, pntB, pntA, tolR, tolB, pal, glpR1, argH, gltL, gltK, gltJ, ksgA, cafA, glpR2, eda, edd, zwf, pgl, glk, pgi2, thiD, rubB, sorA, sorB, purE, purK, fofB, alkD, purC, rimJ, fadH, phaZ1, aroG, dksA, proC, pilT, pilU2, ligT, moaE, moaD, agaY, pgk, tktA, mdmC, uvrD, ohr2, qor, ompR, ompB, rfaC, ung, pcm2, thiC, pykF, glpK, glpF, glpT, glpD, mpd, gst2, cpdB, sir2, rarD, hutC, hutI, hutG, hutU, hutH, tyrB2, lpcA, aes, suhB2, pyrB, pyrI, rhlE3, rsuA, ADA, aldB, aer, exbD2, hslV, hslU, oprM, acrD, acrR, murA, phnA, vacJ, dapD, dapC, comA, soj, recQ, argJ, pilE3, birA, speB, cobS, gpmA, cobT, cobU, leuS, rlpB, holA, hlyB, aceE, aceF, lpdA1, NifR3, fis, purH, purD, tolQ, nagA, nagE, gapA, phoB, phoR, talA, ampD, kup2, proS, mntH, aphB, ilvI, ilvH, ilvC, psd, leuA, bioD, coxB, coxA, ctaG, coxC, ctaA, ctaB, hisG, hisD, hisC, hisB, hisH, hisA, hisF, hisI, hisE, tatA, tatB, tatC, tap, mdlB, mdlA, nuoA1, intB, gmhA, gidA, gidB, parA, parB, atpB, atpE, atpF, atpH, atpA, atpG, atpD, atpC, glmU, srlR, glmS, hpnA, lysR, bdhA, purA1, rhaR, ptxR, mmr, phaZ2, adhC, hemF, cstA2, emrA, emrR, kpsD, thrB, polA, ampG, fsr, wrbA, rbn, cobA2, ptsH, rfaB, rfaQ, rfbU, msbA, aroB, aroK, pilQ, pilP, pilO, pilN, pilM, mrcA, icc, ispB, rplU, rpmA, argT, hisQ1, hisM1, hisP, sodB2, tpx, prlC, xthA, rsbR, rsbT, fpr, qseB, qseC, oprC, hydG, alkK, vanX, phaJ, plcN, dnaE, maeB, dctQ, chrB, chrA, potF2, recG, pitA, pstB, pstA, pstC, pstS, tpiA, secG, nuoA2, nuoB2, nuoC, nuoD, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN, rna, rnsA, htrB, metK, ahcY, metF, hpd, hmgA, cfa, ptsG, prmA, accC, accB, aroQ, queA, ubiE, aarF, ndh, pcaK, metL, thrC, apeE, flgM, rhlE4, cheB2, cheW3, cheA2, cheY2, lysC, motA2, fliA1, fleN, flhF, flhA, flhB1, thyA, folA, ubiG, rtcR, rtcb, ucpA, lysS, prfB, mdh, sdhC, sdhD, sdhA, sdhB, gtlA, sucA, sucB, lpdA2, sucC, sucD, emrY, udk, fdx2, hscA, hscB, nifU, nifS, dppB, dppC, dppD, dppF, kdtB, gltS, trxC, pssA, parE, fumC, acnA1, hemE, priA, dacB, grxC, secB, gpsA, folE, ubiF, adhE, proY, mfd, zntA, tnaA, gst1, pepN, estX, eutC, eutB, aroC, ureJ, murI, mrp, metG, mltD, gloB, rnhA, dnaQ, ispD, ispF, rpiA, phoU, ppx, corA, pncA, copA, bglB, glnP, lgt, ilvD, glyA, ribD, ctaQ, fimA, ecpD, fimD, betA, guaB, uvrC, pgsA, spvC, ampC, hptG, upk, sbcB, pcaD, potG, ordL, mutL, dedA, secF, secD, tgt, thrS, infC, rpmI, rplT, pheS, pheT, ihfA, mscL, phbF, serS, efp, creB, galM, aspB, DegT, sdaA2, sdaC, pflB, pflA, ggt, nahY, ogt, pfkB, mmsA2, nrdE, dapE, pilU1, fadD2, nusA, infB, rbfA, truB, rpsO, pnp, aroF, entA, entB, entE, entC, entF, fecD, ephB, aruC, aruF, astA, aruD, aruB, livH, livM, livG, livF, phoA2, phoA1, hrpA, narP, pta, ackA, putA, fdxA2, cobB, btuR, btuC, cobW, cbiJ, cbiG, cbiF, cbiL, cbiD, cbiC, cobL, cobA1, cobN, hoxN, cobC, cobD, cobQ, cysQ, fabI, trxA, rho, nadC, murB, kdpE, kdpD, kdpC, kdpB, kdpA, alaS, oraA, recA, hrcA, mltB, dnaX, recR, lolA, nadE, fdhD, mobA, acrE, pcnB, folK, dgk, panB, panC, panD, menG, aceA, grpE, dnaK, desD, dnaJ, hemB, kbl, tdh, hemG, glyQ, glyS, gloA, cstA1, mpl, hcnC, hcnB, hcnA, ansA, nadR, trpS1, flgC2, flgD2, flgE2, flgF2, flgG2, flgH2, flgI2, flgK2, flgL2, asnB, cydC, hylD, glnS, ushA, pfkA, cysS, rpmE, mvaB, gstR, gst3, mutT, prkA, hmuU, dapB, omlA, fur, aat, ate1, mmdA, slyB, pyrD, motB1, sohB, rluC, cbl, cysA, cysW, cysU, sbp, phnM, phnL, phnK, phnJ, phnI, phnH, phnG, phnF, phnN, xylB, cynS, cynT, cynR, hipO, rhsA, ssb, uvrA, chiA, infA1, fbpA, fbpB, lrp, dadA2, alr, shlB, folD, purU, nupC, metY, gltX, crcB, clpB, tag, czcR, potF3, potH, potI, argS, exbB1, exbD5, exbD3, nolF, nolG, hbpA, exbB2, exbD1, exbD4, endA, dinG, argI, argG, hslO, ribA, aniA, acpD, ald, motA1, motB2, cca, sltY, fixS, purL, glnB, acnA2, prpC, prpB, rpoE, mucB, mucD, lepA, lepB, rnc, era, recO, pdxJ, acpS, mmsB, paaG, caiA, mmsA1, paaH, atoB, rfaF, ilvE, glnE, cysC, hupB2, maeN, leuD1, leuC2, algC, trpD, pabA, trpE, gph, rpe, apaG, pphA, rluD, comL, rpsB, tsf, pyrH, frr, uppS, cdsA, dxr, ompH, lpxD, fabZ, lpxA, lpxB, rnhB, nasT, nasF, nasA, napA, fepA, fes, cbsF, fepC, fepG, fepD, fepB, acrB, ibeB, nfnB, nemA2, talC, fucP, fhuA, maa, argD, nrdB, nrdA, gyrA, serC, mccF, cysD, cysN, frwC, frwB, ptsA, manA, recN, msrA, umuD, map2, tdk, mglA, moeA, dsbD, pheA, mtrA, fkpA, phaB, orn, pgi1, cinA, xerC, argE, tyrB1, prfC, ribE, ribAB, ribH, nusB, thiL, pgpA, map1, evgS, rcsB, typA, nrdD, nrdG, prgK, prgJ, prgI, prgH, gstA, fbp, arsR, arsC, arsB, pepQ, vmrA, mxcB, acnB, ddlA, recJ, ftsK, hemH, ohr1, fliC2, rnk, hik2, dnaB, sodB1, cheB1, cheR1, cheW1, cheA1, cheY1, purF, dedD, folC, abcZ, prtR, dapF, moaA2, mobB, narX, narL, narI, narJ, narH, narG, narK2, narK1, pqiB, pqiA, hupB1, lon, clpX, clpP, tig, pbpB, iciA, cdd, lasA, codB, sseE, sseD, sseC, cesD, ssaG, ssaJ, ssaL, cpbD, escC, ssaM, escV, pscQ, escR, escS, escT, escU, slt, umuC, iacP, sipA, sipD, sipC, sipB, spaT, spaS, spaR, spaQ, spaP, spaO, spaN, spaM, invC, invB, invA, invE, invG, invF, armS, dsbG, hilA, iagB, dsdA, dsdC, entD, csaA, chaA, valS, bscC, bscZ, bcsB, bscA, emrE, xseB, ispA, dxs, pepD, trpC, lipH, fadA, fadB, metZ, lysP, kup1, kdsA, nuoB1, gcp, accD, trpA, trpB, trpF, truA, usg, asd, leuB, leuD2, leuC1, phaC, phaA, soxR, ampH, trxB, bcp, fmt2, dadA1, rhlE2, dbpA, glpQ, tauD, tauC, tauB, tauA, aqpZ, sdaA1, speA, astE, flgL1, flgK1, flgJ, flgI1, flgH1, flgG1, flgF1, flgE1, flgD1, flgC1, flgB, rtn, rhlE1, holC, pepA, glnD, maoC, ispZ, hmsR, hmsF, hmsH, gntR, gntV, dgoT, ntpA, aefA, lolC, fliY, radA, lafU, lafT, fliA2, fliS2, fliD, fliI2, fliH, fliG2, fliF2, fliP, fliQ2, fliR2, flhB2, fhiA, flaD, caiB, scrR, rbsB, rbsC, rbsA, rbsD, rbsK, mgtC, cysM, lldP, cheV3, pdhR, rfaD, rfaE, ugd, pyrF, himD, rpsA, cmk, aroA, cybB, fruB, fruK, fruA, znuA, znuB, znuC, zur, tyrS, radC, dfp, dut, gdhA, aotJ, hisQ2, hisM2, argR, ilvA, dacC, lipB, lipA, mgtA, mdlC, terC, htpX1, nhaR, pilV, pilW, pilE1, dsbC, visC, ubiH, pepP, fliR1, fliQ1, fliN, fliM, fliL, fliI1, fliG1, fliF1, fliE, hyuA, uvrB, pbpG, leuO, tbpA, pcp1, manC, phhA, fadL, mesJ, accA, dsbH, alkA, alkB, pmbA, mog, cspD, osmB, dgt, gpmB, trh1, copF, CFA, blc, GroES, groEL, rhtC, ebrB, nagD, mgtE, ocd, tdcB, vioD, vioC, vioB, vioA, acsA, pcaC, rnfE, nth, htrA, lamB, treC, treB, treR, aceB, hlfC, cbpD1, kefB, rpoN, ubiX, hydH, adk, kdsB, lpxK, exdD, pgm, prc, argA, ppK, frdD, frdC, frdB, frdA, dcuB, ppa, minC, minD, minE, oxyR, dcp1, dcp2, greB, miaA, cysB2, bfr, trmU, gltP, pabC, pabB, fabF, acpP, fabG1, fabD, fabH, plsX, rpmF, pncB, ompC, tehB, gcvP, gcvH, gcvT, fdxA1, cheB3, cheR2, cheW2, cheA, cheY4, cheV2, cheV1, cheY3, cheZ, rimI, rpmG, rpmB, pyrG, eno, smpB, guaA, elaB, fumA, phrB, hmpA, norB, nfsA, nemA1, ptrB, serB, moaA1, acpA, purA2, hflC, hflX, hfq, hisS, ndk, rdgC, katE, pydA, feoB, dcd, cysK, xseA, lytB, lspA, ileS, ribF, rmpM, cysI, cysH, cysB1, fabG2, dapA, slyD, hemK, mtgA, aroE, glnA, ntrB, glnG, mhpT, metR, metE, ubiA, purM, purN, upp, uraA, dcuA, rplI, rpsR, priB, rpsF, suhB, hemN, glnH, ugpQ, ugpC, ugpA, ugpB, cioB, cioA, ttuD, mutS, cspE, clpA, xerD, rplS, trmD, rimM, rpsP, nadA, surE, pcm1, rpoS, hda, folB, cheR3, argC, rpsI, rplM, deoD, deoB, deoA, deoC, relA, mutY, dctA, ppsA, trpS2, pilZ, holB, tmk, modA, modB, tesA, aspS, ptb, rpsT, mviN, rluA, lysA, mltA, rpoD, dnaG, rpsU, thiG, spoT, rpoZ, gmk, apt, arcC, arcB, arcA, arcD, ubiB, dadB, glmM, folP, hflB, ftsJ, greA, carB, carA, gspN, gspK, gspI, gspH, hofG, hofF, pilC, pilB, ffh, purB, fdnG, fdoH, fdoI, fdhE, rph, flaG, fliC3, fliC1, galE, ilvB, rfbH, rfbG, ddhA, fecE, hpT, galU, lig, argB, natC, goaG, gabD, nadB, FadH, idsA, araL, cyoE, cyoD, cyoC, cyoB, cyoA, dsbA, glnK, amtB, sspB, sspA, petC, petB, petA, rmlB, rfbD, rfbA, rfbC, groEL1, groES1, rfe, wecC, wecB, capH, neuA, neuB, neuC, gltD, gltB, adi, metB, pth, rplY, prsA, ispE, mutM, plsC, apaH, rep, recD, recB, recC, cviR, cviI, potD, potC, potB, potA, ompW, aspA, spsC, wzx, udg, aidB, hoxX, rluB, corC, lnt, rplQ, rpoA, rpsD, rpsK, rpsM, rpmJ, infA2, secY, rplO, rpmD, rpsE, rplR, rplF, rpsH, rpsN, rplE, rplX, rplN, rpsQ, rpmC, rplP, rpsC, rplV, rpsS, rplB, rplW, rplD, rplC, rpsJ, tufA, fusA, rpsG, rpsL, rpoC, rpoB, rplL, rplJ, rplA, rplK, nusG, secE, tufB, fdx1, ftsY, ftsE, ftsX, rpoH, pilE2, bioA, proB, potF1, ruvB, ribB, ruvA, ruvC, IMP, surA, pdxA, sseA, exoA, pyrE, cutA, dps, moeB, atoS, htpX2, fmt, def, smf, smg, topA, dgkA, gshB, dsbE, secA, phoD, proA, catF, hetM, trg, betT, preP, cdh, luxE, oppF, oppD, oppC, oppB, pyrC, moaC, lpxC, ftsZ, ftsA, ftsQ, ddlB, murC, murG, ftsW, murD, mraY, murF, murE, ftsI, gatB, gatA, gatC, mreB, mreC, mreD, mrdA, mrdB, pqqL, dinP, araC, aroP, paiA, bioC, bioH, bioF, bioB, comF, rlpA, engB, cyc, nrfE, macA, thdF, yidC, rnpA, rpmH

Note: genome sequence

PRJNA444 - Tropical and subtropical environmental organism which produces the bacteriocidal pigment violacein

Note: as ATCC 12472

UFVI00000000 - genomic DNA

Note: as NCTC 9757

Literature:

(2003)The complete genome sequence ofChromobacterium violaceumreveals remarkable and exploitable bacterial adaptability.Proceedings of the National Academy of Sciences100(20)11660-11665. DOI: 10.1073/pnas.1832124100

Note: ATCC 12472

(1958)Opinion 16 Conservation of the Generic Name Chromobacterium and the Neotype Culture of the Type Species Bergonzini 1880 and Designation of the Type Species.International Bulletin of Bacteriological Nomenclature and Taxonomy8(3-4)151-152. DOI: 10.1099/0096266X-8-3-4-151

Note: neotypification of Chromobacterium violaceum

Culture events

Deposited:

Actioned by:

BCCM/LMG Bacteria Collection (Reference number LMG 1267)

Date:

01 July 1984 (Verbatim: Jul 1984)

Transferred via:

Actioned by:

National Collection of Type Cultures (Reference number NCTC 9757)

Transferred from:

Actioned by:

P. H. A. Sneath (Reference number MK)

Date:

before 1956 (Verbatim)

Duplicates

NCIMB (UK): NCIB 9131

Direction:

Duplicate

American Type Culture Collection: ATCC 12472

Direction:

Duplicate

Assigned reference numbers

NZRCCNo:

NZRCC 10491

PDDCC:

PDDCC 8644

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice