Systematics Collections Data

ICMP 6917 – Pseudomonas cichorii (Swingle 1925) Stapp

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 6917
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
27 October 2023
Components
Primary component
Active identification
Determined name:
Pseudomonas cichorii (Swingle 1925) Stapp 1928
Determiner:
Identification date:
Preferred name:
Pseudomonas cichorii (Swingle 1925) Stapp
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Determination
Associations:
isolated from Carthamus tinctorius L.
Other identifications
Identification
Determined name:
Pseudomonas sp.
Determiner:
Identification date:
Preferred name:
Pseudomonas cichorii (Swingle 1925) Stapp
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Carthamus tinctorius L.
Determiner:
Identification date:
Preferred name:
Carthamus tinctorius L.
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Asterales
Family:
Compositae
Vernacular name:
safflower
Identification type:
Determination
Part affected:
stem lesion
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
New Zealand
Georeferences:
Latitude and Longitude (WGS84):  -42  174   (WGS84 -42. 174.)
Verbatim locality:
New Zealand
Verbatim collector:
D.R.W Watson
Standardised collector:
Denis R. W. Watson
Verbatim date:
Feb 1980
Start date:
1980-02
Country:
New Zealand
New Zealand Area Codes:
New Zealand
Culture flags
Price Category:
Category 1
Culture notes
Pathogenic to:
chrysanthemum, cornflower, poppy, Ranunculus repens, safflower, tomato
Characterised as:
LOPAT III
External links
GenBank:

RBRY00000000 - genomic DNA

PRJNA292453 - Pseudomonas Genome sequencing and assembly

Literature:

Young, J. M.; Watson, D. R. W.; Fletcher, M. J.; Kemp, W. J. (1987)Isolation ofPseudomonas cichoriifrom plants in New Zealand.New Zealand Journal of Agricultural Research30(4)511-516. DOI: 10.1080/00288233.1987.10417966

Jayaraman, Jay; Jones, William T.; Harvey, Dawn; Hemara, Lauren M.; McCann, Honour C.; Yoon, Minsoo; Warring, Suzanne L.; Fineran, Peter C.; Mesarich, Carl H.; Templeton, Matthew D. (2020)Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the Pseudomonas syringae species complex.Environmental Microbiology22(12)5356-5372. DOI: 10.1111/1462-2920.15250

Lu, Can-Hua; Han, Tian-Hua; Jiang, Ning; Gai, Xiao-Tong; Cao, Zheng-Hua; Zou, Si-Yuan; Chen, Wei; Ma, Jun-Hong; Lin, Zhong-Long; Li, Jie; Liao, De-Zhi; Zhang, Li-Qun; Jin, Yan; Xia, Zhen-Yuan (2022) Pseudomonas lijiangensis sp. nov., a novel phytopathogenic bacterium isolated from black spots of tobacco. International Journal of Systematic and Evolutionary Microbiology 72(10). DOI: 10.1099/ijsem.0.005591

Zhao, Mei; Koirala, Santosh; Chen, Hsiao-Chun; Gitaitis, Ronald; Kvitko, Brian; Dutta, Bhabesh (2021) Pseudomonas capsici sp. nov., a plant-pathogenic bacterium isolated from pepper leaf in Georgia, USA. International Journal of Systematic and Evolutionary Microbiology 71(8). DOI: 10.1099/ijsem.0.004971

Iiyama, Kazuhiro; Tani, Sayo; Yagi, Haruka; Hashimoto, Sara; Suga, Yasuhiro; Tsuchiya, Kenichi; Furuya, Naruto (2021)d-Tartrate utilization correlates with phylogenetic subclade inPseudomonas cichorii.FEMS Microbiology Letters368(2). DOI: 10.1093/femsle/fnaa223

Note: has tarD and dctA gene homologs for d-tartrate utilisation. Compare ICMP 3353 which does not

Culture events
Isolated:
Actioned by:
Denis R. W. Watson (Reference number A2712)
Date:
01 February 1980 (Verbatim: Feb 1980)
Deposited:
Actioned by:
Denis R. W. Watson (Reference number A2712)
Date:
01 March 1980 (Verbatim: Mar 1980)
Assigned reference numbers
NZRCCNo:
NZRCC 10532
PDDCC:
PDDCC 6917
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice