Systematics Collections Data

ICMP 20573 – Xanthomonas fragariae Kennedy and King

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 20573
Culture type:
Bacterial Culture
Database record added:
23 July 2014
Database record updated:
28 February 2023
Components
Primary component
Active identification
Determined name:
Xanthomonas fragariae Kennedy & King 1962
Determiner:
R. Taylor
Determiners reference no.:
T14-02611B
Identification date:
2014-06-11 (Verbatim: 11 Jun 2014)
Preferred name:
Xanthomonas fragariae Kennedy and King
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Lysobacterales
Family:
Lysobacteraceae
Identification type:
Determination
Associations:
isolated from Fragaria ×ananassa Duchesne
Other components
Active identification
Determined name:
Fragaria ×ananassa Duchesne
Determiner:
Identification date:
Preferred name:
Fragaria ×ananassa Duchesne
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Rosales
Family:
Rosaceae
Vernacular name:
Strawberry
Identification type:
Determination
Part affected:
Fruit - calyx leaf material showing angular black leaf spot symptoms with bacterial ooze
Collection events
Primary collection event
Collection event type:
Unknown
Standard locality
Location:
Santa Cruz County, California
Georeferences:
Latitude and Longitude (WGS84):  37.03  -122.01 
Verbatim locality:
Santa Cruz County, California
Verbatim collector:
R. Taylor
Standardised collector:
Robert K. Taylor
Verbatim date:
11 Jun 2014
Start date:
2014-06-11
Country:
United States
Culture flags
MPI:
Restricted Culture  (transfer)
MPI:
Unwanted Organism
Culture notes
Other Details:
Intercepted at NZ border on imported strawberries from USA
R. Taylor
Characterised as:
Confirmed by positive test for X. fragariae by 2 PCR assays
R. Taylor
Growth Conditions:
Wilbrinks media or YNDA @ 24 C for 5-7 days
External links
GenBank:

PRJEB25730

ORYO00000000 - genomic DNA

Literature:

Gétaz, Michael; Krijger, Marjon; Rezzonico, Fabio; Smits, Theo H. M.; van der Wolf, Jan M.; Pothier, Joël F. (2018)Genome-based population structure analysis of the strawberry plant pathogen Xanthomonas fragariae reveals two distinct groups that evolved independently before its species description.Microbial Genomics4(7). DOI: 10.1099/mgen.0.000189

Immanuel, Tracey; Taylor, Robert; Keeling, Stephanie; Brosnahan, Cara; Alexander, Brett (2020)Discrimination between viable and dead Xanthomonas fragariae in strawberry using viability PCR.Journal of Phytopathology168(6)363-373. DOI: 10.1111/jph.12900

Culture events
Deposited:
Actioned by:
Robert K. Taylor (Reference number T14-2611B)
Date:
22 July 2014 (Verbatim: 22 Jul 2014)
Isolated:
Actioned by:
Robert K. Taylor (Reference number T14-02611B)
Date:
11 June 2014 (Verbatim: 11 Jun 2014)
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice