Systematics Collections Data

ICMP 19927 – Epicoccum italicum Q. Chen, Crous & L. Cai

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 19927
Culture type:
Fungal Culture
Database record added:
05 August 2013
Database record updated:
18 June 2022
Components
Primary component
Active identification
Determined name:
Epicoccum italicum Q. Chen, Crous & L. Cai
Determiner:
M. Fokin; B.S. Weir
Identification date:
2018 (Verbatim: 2018)
Preferred name:
Epicoccum italicum Q. Chen, Crous & L. Cai
Division:
Ascomycota
Class:
Dothideomycetes
Order:
Pleosporales
Family:
Didymellaceae
Identification type:
Determination
Note:
genome sequence
Substrate:
Air
Other identifications
Identification
Determined name:
Epicoccum purpurascens
Determiner:
Identification date:
Preferred name:
Epicoccum purpurascens Ehrenb.
Active:
no
Identification type:
Determination
Identification
Determined name:
Epicoccum nigrum Link
Determiner:
M. Fokin
Identification date:
2017 (Verbatim: 2017)
Preferred name:
Epicoccum purpurascens Ehrenb.
Active:
no
Identification type:
Determination
Collection events
Primary collection event
Collection event type:
Cultured
Standard locality
Location:
City Campus, The University of Auckland
Georeferences:
Latitude and Longitude (WGS84):  -36.85  174.77 
Verbatim locality:
Auckland University City Campus
Verbatim collector:
Verbatim date:
Jan 2007
Start date:
2007-01
Country:
New Zealand
New Zealand Area Codes:
Auckland
Native lands:
Ngāi Tai ki Tāmaki
Ngāti Maru (Hauraki)
Ngāti Paoa
Ngāti Tamaoho
Ngāti Tamaterā
Ngāti Whātua
Ngāti Whātua o Ōrākei
Te Ākitai Waiohua
Te Kawerau a Maki
Te Patukirikiri
Georeferences:
Latitude and Longitude (WGS84):  -36.85  174.77 
Culture flags
Price Category:
Category 1
Culture notes
Growth Conditions:
Czapek Yeast Agar, 25 C
External links
GenBank:

NCTX00000000 - genomic DNA

Note: genome sequence

PRJNA379853 - Epicoccum nigrum strain:ICMP 19927 Genome sequencing and assembly

Literature:

Fokin, Mikhail; Fleetwood, Damien; Weir, Bevan S.; Villas-Boas, Silas (2017) Genome Sequence of the Saprophytic Ascomycete Epicoccum nigrum Strain ICMP 19927, Isolated from New Zealand .Genome Announcements5(24). DOI: 10.1128/genomeA.00557-17

Lim, Yoon Ji; Choi, Eunha; Park, Si-Hyung; Kwon, Hyung-Jin (2020)Genetic localization of the orevactaene/epipyrone biosynthetic gene cluster in Epicoccum nigrum.Bioorganic & Medicinal Chemistry Letters30(14)127242-. DOI: 10.1016/j.bmcl.2020.127242

Lee, Alex J.; Cadelis, Melissa M.; Kim, Sang H.; Swift, Simon; Copp, Brent R.; Villas-Boas, Silas G. (2020)Epipyrone A, a Broad-Spectrum Antifungal Compound Produced by Epicoccum nigrum ICMP 19927.Molecules25(24)5997-. DOI: 10.3390/molecules25245997

Culture events
Deposited:
Note:
strain is known as SF7849 or SVB-F1
Actioned by:
Biotelliga Ltd (Reference number SVB-F1)
Date:
02 August 2013 (Verbatim: 2 Aug 2013 )
Duplicates
National Measurement Institute, Australia (NMI) : V10/000331
Direction:
Duplicate
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice