Systematics Collections Data

ICMP 17993 – Colletotrichum fioriniae (Marcelino & Gouli) Pennycook 2017

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 17993
Culture type:
Fungal Culture
Database record added:
16 July 2009
Database record updated:
04 December 2019
Components
Primary component
Active identification
Determined name:
Colletotrichum fioriniae (Marcelino & Gouli) Pennycook 2017
Determiner:
Identification date:
Preferred name:
Colletotrichum fioriniae (Marcelino & Gouli) Pennycook 2017
Division:
Ascomycota
Class:
Sordariomycetes
Order:
Glomerellales
Family:
Glomerellaceae
Identification type:
Determination
Associations:
isolated from Fragaria X ananassa
Other identifications
Identification
Determined name:
Colletotrichum acutatum J.H. Simmonds
Determiner:
P.R. Johnston
Identification date:
Preferred name:
Colletotrichum acutatum J.H. Simmonds
Active:
no
Identification type:
Determination
Identification
Determined name:
Colletotrichum acutatum
Determiner:
Identification date:
Preferred name:
Colletotrichum acutatum J.H. Simmonds
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Fragaria X ananassa
Determiner:
Identification date:
Preferred name:
Fragaria ×ananassa Duchesne
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Rosales
Family:
Rosaceae
Identification type:
Determination
Part affected:
fruit rot
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Papakura
Georeferences:
Latitude and Longitude (WGS84):  -37.0625  174.941944 
Verbatim locality:
Papakura, Great South Road, Wildman farm
Verbatim collector:
P.R. Johnston
Standardised collector:
Peter R. Johnston
Collectors reference no.:
C1061.1
Verbatim date:
5/12/1988
Start date:
1988-12-05
Country:
New Zealand
New Zealand Area Codes:
Auckland
Culture flags
Price Category:
Category 1
External links
GenBank:

JARH00000000 - genomic DNA

Note: genome sequence

JQ949655 - ACT

JQ949325 - HIS3

JQ948995 - CHS-1

JQ949985 - TUB2

JQ948664 - GAPDH

JQ948334 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

PRJNA233987 - Colletotrichum fioriniae PJ7 Genome sequencing and assembly

Literature:

Baroncelli, Riccardo; Amby, Daniel Buchvaldt; Zapparata, Antonio; Sarrocco, Sabrina; Vannacci, Giovanni; Le Floch, Gaétan; Harrison, Richard J.; Holub, Eric; Sukno, Serenella A.; Sreenivasaprasad, Surapareddy; Thon, Michael R. (2016)Gene family expansions and contractions are associated with host range in plant pathogens of the genus Colletotrichum.BMC Genomics17(1). DOI: 10.1186/s12864-016-2917-6

Guerber, John C.; Liu, Bo; Correll, James C.; Johnston, Peter R. (2003)Characterization of diversity inColletotrichum acutatumsensu latoby sequence analysis of two gene introns, mtDNA and intron RFLPs, and mating compatibility.Mycologia95(5)872-895. DOI: 10.1080/15572536.2004.11833047

Note: cited as isolate PJ7

Lardner, R.; Johnston, P.R.; Plummer, K.M.; Pearson, M.N. (1999)Morphological and molecular analysis of Colletotrichum acutatum sensu lato.Mycological Research103(3)275-285. DOI: 10.1017/S0953756298007023

Note: Cited as PRJ isolate C1061.1 and 10.211

Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Crous, P.W. (2012)The Colletotrichum acutatum species complex.Studies in Mycology7337-113. DOI: 10.3114/sim0010

Guerber, John C.; Correll, James C. (2001)Characterization of Glomerella acutata, the Teleomorph of Colletotrichum acutatum.Mycologia93(1)216-. DOI: 10.1080/00275514.2001.12063151

Culture events
Isolated:
Date:
05 December 1988 (Verbatim: 05 Dec 1988)
Deposited:
Note:
Richard Lardner single spore isolate
Actioned by:
Peter R. Johnston (Reference number 10.211)
Date:
16 July 2009 (Verbatim: 16 Jul 2009)
Duplicates
CABI: IMI 345578
Direction:
Sent
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice