Systematics Collections Data

ICMP 14272 – Fusarium oxysporum Schltdl.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 14272
Culture type:
Fungal Culture
Database record added:
25 January 2002
Database record updated:
22 September 2020
Components
Primary component
Active identification
Determined name:
Fusarium oxysporum Schltdl.
Determiner:
Identification date:
Preferred name:
Fusarium oxysporum Schltdl.
Division:
Ascomycota
Class:
Sordariomycetes
Order:
Hypocreales
Family:
Nectriaceae
Identification type:
Determination
Note:
based on EF1a and IGS, Johnston et al. 2007 Landcare Research Contract Report: LC0607/177, referred to as 'saprobe Clade P'; based on EF1a matches haplotypes ST 26, 73, 107, 221, 226, 230 sensu O'Donnell et al. Fungal Genetics and Biology 46: 936-948, 2009
Associations:
isolated from Valeriana officinalis L.
Other identifications
Identification
Determined name:
Fusarium oxysporum
Determiner:
Identification date:
Preferred name:
Fusarium oxysporum Schltdl.
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Valeriana officinalis L.
Determiner:
Identification date:
Preferred name:
Valeriana officinalis L. 1753
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Dipsacales
Family:
Caprifoliaceae
Vernacular name:
common valeria, garden heliotrope
Identification type:
Determination
Part affected:
stem/crown, vascular and internal browning, poor growth
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Gisborne
Georeferences:
Latitude and Longitude (WGS84):  -38.6625  178.017778 
Verbatim collector:
M. Braithwaite
Standardised collector:
Mark Braithwaite
Verbatim date:
Jul 2001
Start date:
2001-07
Country:
New Zealand
New Zealand Area Codes:
Gisborne
Culture flags
Price Category:
Category 1
Culture notes
Note:
oxysporum O'Donnell et al. 2009 Haplotypes 26, 73, 107, 221, 226, 230; saprobe clade P, MAF report
External links
GenBank:

KM092448 - tef1

Literature:

O’Donnell, Kerry; Gueidan, Cécile; Sink, Stacy; Johnston, Peter R.; Crous, Pedro W.; Glenn, Anthony; Riley, Ron; Zitomer, Nicholas C.; Colyer, Patrick; Waalwijk, Cees; Lee, Theo van der; Moretti, Antonio; Kang, Seogchan; Kim, Hye-Seon; Geiser, David M.; Juba, Jean H.; Baayen, Robert P.; Cromey, Matthew G.; Bithell, Sean; Sutton, Deanna A.; Skovgaard, Kerstin; Ploetz, Randy; Corby Kistler, H.; Elliott, Monica; Davis, Mike; Sarver, Brice A.J. (2009)A two-locus DNA sequence database for typing plant and human pathogens within the Fusarium oxysporum species complex.Fungal Genetics and Biology46(12)936-948. DOI: 10.1016/j.fgb.2009.08.006

Culture events
Isolated:
Date:
01 July 2001 (Verbatim: 01 Jul 2001)
Deposited:
Actioned by:
Mark Braithwaite (Reference number 3/01/1476)
Date:
27 August 2001 (Verbatim: 27 Aug 2001)
Transferred via:
Actioned by:
J. Fletcher
Transferred from:
Actioned by:
Mark Braithwaite
Duplicates
ARS Culture Collection: NRRL 38602
Direction:
Sent
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice