Systematics Collections Data

ICMP 5856 – Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 5856
Type status:
Reference strain
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
02 October 2023
Components
Primary component
Active identification
Determined name:
Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn
Determiner:
Encarna Velázquez
Identification date:
2020 (Verbatim: 2020)
Preferred name:
Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn
Division:
Pseudomonadota
Class:
Alphaproteobacteria
Order:
Hyphomicrobiales
Family:
Rhizobiaceae
Identification type:
Determination
Note:
16S sequence
Type status:
Reference strain
Other identifications
Identification
Determined name:
Agrobacterium tumefaciens (Smith & Townsend 1907) Conn 1942
Determiner:
Identification date:
Preferred name:
Agrobacterium tumefaciens (Smith and Townsend 1907) Conn
Active:
no
Identification type:
Determination
Type status:
Type strain
Identification
Determined name:
Agrobacterium tumefaciens
Determiner:
Identification date:
Preferred name:
Agrobacterium tumefaciens (Smith and Townsend 1907) Conn
Active:
no
Identification type:
Received as
Collection events
Primary collection event
Collection event type:
Unknown
Standard locality
Location:
[Unknown]
Verbatim locality:
[Unknown]
Verbatim collector:
George L. McNew
Standardised collector:
G. L. McNew
Verbatim date:
before 1946
Start date:
1946
Culture flags
MPI:
Restricted Culture
Price Category:
Category 2
Culture notes
Strain Data:
tumourigenic strains
Pathogenic to:
bean, capsicum, coleus, lupin, marigold, sunflower, tomato, zinnia
Characterised as:
Biovar 1
Growth Conditions:
Kings B or YNA @ 26 C for 3 days
External links
GenBank:

QSNU00000000 - genomic DNA

PRJNA484236 - Agrobacterium tumefaciens strain:ICMP 5856T Genome sequencing and assembly

PRJDB10667

MT758045 - 16S ribosomal RNA

MT759983 - 16S ribosomal RNA

KX621317 - 16S ribosomal RNA

KX646709 - gyrB

KX646731 - recA

MT547653 - recA

Note: as ATCC 23308

Literature:

Braun, Armin C. (1953)Bacterial and Host Factors Concerned in Determining Tumor Morphology in Crown Gall.Botanical Gazette114(4)363-371. DOI: 10.1086/335780

Starr, Mortimer P. (1946)The Nutrition of Phytopathogenic Bacteria.Journal of Bacteriology52(2)187-194. DOI: 10.1128/jb.52.2.187-194.1946

Braun, Armin C. (1948)Studies on the Origin and Development of Plant Teratomas Incited by the Crown-Gall Bacterium.American Journal of Botany35(8)511-. DOI: 10.2307/2438169

Note: B strains were supplied by Prof. George L. McNew

Hamada, S E; Farrand, S K (1980)Diversity among B6 strains of Agrobacterium tumefaciens.Journal of Bacteriology141(3)1127-1133. DOI: 10.1128/jb.141.3.1127-1133.1980

Note: diversity of B6 strains

Culture events
Deposited:
Actioned by:
National Collection of Plant Pathogenic Bacteria (Reference number NCPPB 2437)
Date:
01 March 1978 (Verbatim: March 1978)
Transferred via:
Actioned by:
Mortimer P. Starr (Reference number ICPB TT3)
Date:
1972 (Verbatim)
Isolated:
Actioned by:
A. C. Braun (Reference number B6)
Date:
before 1946 (Verbatim)
Duplicates
American Type Culture Collection: ATCC 23308
Direction:
Duplicate
Belgian Coordinated Collections of Microorganisms: LMG 187
Direction:
Duplicate
French Collection for Plant-associated Bacteria: CFBP 2413
Direction:
Duplicate
Assigned reference numbers
NZRCCNo:
NZRCC 10204
PDDCC:
PDDCC 5856
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice