Specimen Details

ICMP 4091 – Pseudomonas syringae pv. tagetis (Hellmers 1955) Young et al.

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 4091

Type status:

Pathotype strain

Culture type:

Bacterial Culture

Database record added:

25 January 2002

Database record updated:

05 January 2025

Components

Primary component

Active identification

Determined name:

Pseudomonas syringae pv. tagetis (Hellmers 1955) Young et al. 1978

Determiner:

Identification date:

Preferred name:

Pseudomonas syringae pv. tagetis (Hellmers 1955) Young et al.

Division:

Pseudomonadota

Class:

Gammaproteobacteria

Order:

Pseudomonadales

Family:

Pseudomonadaceae

Identification type:

Determination

Associations:

isolated from Tagetes erecta L.

Other identifications

Identification

Determined name:

Pseudomonas syringae pv. tagetis

Determiner:

Identification date:

Preferred name:

Pseudomonas syringae pv. tagetis (Hellmers 1955) Young et al.

Active:

Identification type:

Received as

Other components

Active identification

Determined name:

Tagetes erecta L.

Determiner:

Identification date:

Preferred name:

Tagetes erecta L.

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Asterales

Family:

Compositae

Vernacular name:

African marigold

Identification type:

Determination

Present:

Collection events

Primary collection event

Collection event type:

Field

Verbatim locality:

[Unknown]

Verbatim collector:

J.F. Bradbury

Standardised collector:

J. F. Bradbury

Verbatim date:

1972

Start date:

1972

Country:

Zimbabwe

Culture flags

MPI:

Restricted Culture

Price Category:

Category 2

MPI:

Unwanted Organism

Culture notes

Other Details:

produces tagetitoxin (Lydon)

Characterised as:

LOPAT Ib

External links

GenBank:

PRJNA292453 - Pseudomonas Genome sequencing and assembly

LJRM00000000 - genomic DNA

KU161385 - dnaX

AY342202 - 16S-23S ribosomal RNA intergenic spacer

[TRUNCATED] CP092923 - rep, cysW, cysT, oscA, gabT, gabD, lysA, istA, istB, yejB, argE, hslO, rimK, gltP, rnk, cyaY, dapF, xerC, glnK, recG, exbD, exbB, spoT, rpoZ, gmk, rph, pyrE, argB, dut, coaBC, radC, rpmB, rpmG, dadR, dadA, alr, gcvT, gcvH, argA, gshA, ompR, algB, yihA, polA, znuA, znuC, znuB, katE, elbB, hemB, ppk1, ppx, trxA, rho, ubiD, glpT, fliL, ssrS, pepP, ubiH, yecC, tcyL, tcyJ, nhaA, hutC, pip, dtd, mdoH, tatC, tatB, hisI, ubiB, ubiE, phaC, phaZ, hslU, hslV, argS, rpmE, pilO, pilP, aroK, aroB, gltB, hemE, fabG, mdcA, mdcE, mdcH, madL, madM, metF, ahcY, alaC, ilvD, hemW, rdgB, metW, proC, pyrR, ruvX, gshB, pilG, pilH, mscK, putA, putP, yccS, dbpA, aceF, aceE, glnE, waaF, waaC, rfaP, msbA, hldE, waaA, thiC, cytX, cpdA, parE, parC, serB, asd, motA, motB, rsgA, orn, queG, tsaE, mutL, miaA, hfq, hflX, hflK, hflC, rnr, rlmB, rpsF, rpsR, rplI, dnaB, azu, nadE, pncB, livM, dxs, metC, yghU, ppa, eutC, mpl, ubiX, cueR, fecE, fecC, rrf, recC, recB, recD, mmsB, ggt, phnE, selD, mnmH, rplU, rpmA, cgtA, proB, rpsT, murJ, ribF, ileS, lspA, ispH, pilV, thiO, rluD, pgeF, clpB, hopQ1-1, pilM, cheD, yacG, coaE, pilB, nadC, ampD, ampE, cra, ptsP, pfkB, pgi, panC, panB, folK, gluQRS, dksA, sfsA, deoC, mrcB, ilvN, ilvC, pssA, msrP, msrQ, rimI, can, bcsQ, bcsA, bcsB, bcsZ, vapB, gmd, rfbG, rfbF, rfbA, rfbD, rfbB, ychF, pth, ispE, lolB, hemA, prfA, prmC, murI, phrB, hemH, upp, mqo, rutF, rutD, rutC, rutB, rutA, rutR, pta, cysZ, trxB, folX, folE, folM, wecB, algG, algK, alg8, yaaA, moaC, moaD, moaE, rhlB, yejK, rlmF, lptF, lptG, gcvP, gap, edd, zwf, pgl, cyoA, cyoB, cyoD, cyoE, sodC, hpxZ, atzF, hmpA, sctI, sctJ, sctL, sctC, sctU, sctT, sctS, sctR, hrcN, sctD, sctV, sctW, queA, tgt, yajC, secD, secF, suhB, trmJ, cysE, iscR, iscU, iscA, hscB, hscA, fdx, iscX, ndk, rlmN, pilW, ispG, hisS, bamB, der, leuA, xseA, guaB, guaA, tadA, mltF, purL, purT, ccsA, ffh, rpsP, rimM, trmD, rplS, xerD, dsbC, thrC, recJ, prfB, lysS, ppc, adk, tsaB, plsB, dapE, tcdA, dapD, dapC, map, rpsB, tsf, pyrH, frr, uppS, ispC, rseP, bamA, lpxD, fabZ, lpxA, lpxB, rnhB, dnaE, accA, tilS, kdsA, eno, ftsB, ispD, fghA, ispF, truD, surE, rpoS, mutS, recA, recX, fpr, tsaA, rimO, mprF, dinB, aspS, ruvC, ruvA, ruvB, ybgC, tolQ, tolR, tolA, tolB, pal, ybgF, queE, queC, gspM, gspD, traD, nadA, dapA, bamC, tnpB, rnd, cysK, rdgC, minE, minD, minC, lpxK, kdsB, murB, rne, rluC, sppA, rpmF, plsX, fabD, acpP, fabF, pabC, mltG, tmk, truA, accD, folC, purF, ilvA, pepN, mntP, acnB, lpxH, cysS, folD, tig, clpP, clpX, lon, fabI, gloB, rnhA, dnaQ, vgrG, alc, uraD, puuE, uraH, guaD, xdhC, xdhB, xdhA, smc, zipA, ligA, ffs, dnaX, tusA, pdxB, eat, pyrF, prmB, aroC, mtnC, speE, mfd, sthA, lolD, queF, tal, dusA, pvdM, uvrB, gltX, leuC, leuD, leuB, dgoD, gltA, sdhC, sdhD, sdhA, odhB, lpdA, sucC, sucD, brnQ, htpG, fabB, fabA, sixA, kdpF, kdpA, kdpB, kdpC, greB, oprI, cysB, thrH, pabB, prpB, prpC, acnD, prpF, ppsA, rraA, sigX, cobA, rlmKL, dacB, pcaQ, pcaH, pcaG, pcaC, mobA, moaB, rbsK, rbsD, thrS, infC, rpmI, rplT, pheS, pheT, ihfA, ureG, ureC, ureE, urtE, urtD, urtC, urtB, urtA, purU, phnC, phnD, phnF, phnG, phnH, phnK, phnL, phnN, phnP, folE2, glnT, sfnG, ybtE, glsB, norR, mrdA, poxB, moaA, tssA, tssB, tssC, tssE, tssF, tssG, tssH, tssJ, tssK, icmH, tssM, araG, araH, dctA, ribBA, pbpG, nhaR, xylB, ugpC, cobF, nudC, sohB, metH, nfuA, xthA, tpx, treS, glgB, lexA, imuA, dhaL, rpiB, paoA, arnB, arnC, arnA, arnD, arnT, arnE, arnF, glf, galE, mhpT, ftrA, sbnB, modA, modB, modC, xylA, xylF, xylG, pgsA, uvrC, uvrY, pgm, glnH, glnP, glnQ, ehuB, ehuC, ehuD, gloA, ahpF, ahpC, gorA, galU, alkB, gnd, glgA, treZ, malQ, glgX, pcaD, pnuC, cobN, cobW, cobM, mapR, nirB, nirD, pstB, pstA, pstC, pstS, gudD, pncA, gspG, gspF, gspE, solA, tusD, tusC, tusB, cysG, serS, crcB, lolA, ftsK, aat, infA, clpA, clpS, cspD, mnmA, hflD, purB, aceA, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN, queD, rhtA, rfaH, ssuE, ligD, ssuD, iolD, iolB, iolE, iolC, clsB, nagZ, psrA, topA, fadA, fadB, yegS, fahA, hmgA, hppD, maiA, glcD, glcE, glcF, csrA, katB, rarD, zapE, ada, efeO, efeB, ccmI, ccmE, ccmD, ccmB, ccmA, recR, rlmM, acnA, ccoN, ccoO, ccoP, ccoG, cadA, ccoS, hemN, fnr, motD, fliA, fleN, flhF, flhA, flhB, fliR, fliP, fliO, fliN, fliM, fliJ, fliI, fliH, fliG, fliF, fliE, fleQ, fliT, fliS, fliD, flgK, flgJ, flgH, flgG, flgE, flgD, flgC, flgB, cynS, cynR, cheR, flgA, flgM, ppnN, pobA, pdxA, mgtE, alaS, ltaE, astE, astB, astD, astA, aruF, argR, acs, phhA, arfB, rluB, scpB, msrB, htpX, earP, ihfB, rpsA, cmk, pheA, serC, gyrA, mtnA, ubiG, mupP, rmuC, cobT, cobU, cobD, cbiB, bluB, cobO, hda, purM, purN, mazG, relA, rlmD, cysM, arsC, wrbA, ttcA, fhuF, recQ, pap, mnmC, ngg, def, phbB, hrpA, fadD1, fadD2, rapA, livH, livG, pdxH, dinG, pdeM, dcd, apbC, metG, rsxB, nth, pyrC, rnt, bfr, grxD, argF, ybaK, glpK, glpD, metE, metR, ddlA, cmoA, cmoB, pdxJ, recO, era, rnc, lepB, lepA, rpoE, nadB, ung, uca, yiaY, bglX, adeC, pcaF, pcaR, sbcB, pyk, colR, groL, fxsA, argJ, secA, lpxC, ftsZ, ftsA, murC, murG, ftsW, murD, mraY

CP092924 - eno, ppa, virB5, virB9, virB11

CP092925 - lhgO, virB5, virB11

NZ_CP092923 - genomic DNA

NZ_CP092924 - eno, ppa, virB5, virB9, virB11, stbB

NZ_CP092925 - lhgO, virB5, virB11, stbB

LC033973 - hrpS, hrpA, hrpZ, hrpB

PRJNA812078 - Pseudomonas syringae pv. tagetis strain:ICMP4091 Genome sequencing

NZ_LJRM01000000

Literature:

Ruinelli, Michela; Blom, Jochen; Smits, Theo H. M.; Pothier, Joël F. (2019)Comparative genomics and pathogenicity potential of members of the Pseudomonas syringae species complex on Prunus spp.BMC Genomics20(1). DOI: 10.1186/s12864-019-5555-y

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Culture links

Relates To:

ICMP 4521

Culture events

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Douglas W. Dye (Reference number LC1)

Date:

01 November 1974 (Verbatim: 01 Nov 1974)

Transferred via:

Actioned by:

National Collection of Plant Pathogenic Bacteria (Reference number NCPPB 2488)

Isolated:

Actioned by:

J. F. Bradbury (Reference number B5063)

Date:

1972 (Verbatim)

Duplicates

Belgian Coordinated Collections of Microorganisms: LMG 5092

Direction:

Duplicate

French Collection for Plant-associated Bacteria: CFBP 1694

Direction:

Duplicate

Assigned reference numbers

NZRCCNo:

NZRCC 10309

PDDCC:

PDDCC 4091

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice