Specimen Details

ICMP 3918 – Pseudomonas amygdali Psallidas & Panagopoulos 1975

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 3918

Type status:

Type strain

Culture type:

Bacterial Culture

Database record added:

25 January 2002

Database record updated:

03 March 2021

Components

Primary component

Active identification

Determined name:

Pseudomonas amygdali Psallidas & Panagopoulos 1975

Determiner:

Identification date:

Preferred name:

Pseudomonas amygdali Psallidas & Panagopoulos 1975

Division:

Pseudomonadota

Class:

Gammaproteobacteria

Order:

Pseudomonadales

Family:

Pseudomonadaceae

Identification type:

Determination

Associations:

isolated from Prunus dulcis (Mill.) D.A. Webb

Other identifications

Identification

Determined name:

Pseudomonas amygdali

Determiner:

Identification date:

Preferred name:

Pseudomonas amygdali Psallidas & Panagopoulos 1975

Active:

Identification type:

Received as

Other components

Active identification

Determined name:

Prunus dulcis (Mill.) D.A. Webb

Determiner:

Identification date:

Preferred name:

Prunus amygdalus Batsch

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Rosales

Family:

Rosaceae

Vernacular name:

Almond

Identification type:

Determination

Part affected:

Leaf

Present:

Collection events

Primary collection event

Collection event type:

Field

Verbatim locality:

[Unknown]

Verbatim collector:

Verbatim date:

Country:

Greece

Culture flags

MPI:

Restricted Culture

Price Category:

Category 2

MPI:

Unwanted Organism

Culture notes

Growth Conditions:

Medium PDA or yeast malt agar or yeast salts agar (5 days)

External links

GenBank:

PRJNA295880 - Pseudomonas amygdali strain:ICMP 3918 Genome sequencing and assembly

LJPQ00000000 - genomic DNA

PRJNA292453 - Pseudomonas Genome sequencing and assembly

LKBW00000000 - genomic DNA

LC364096 - gyrB

KU161318 - dnaX

Literature:

Visnovsky, Sandra B.; Marroni, Maria V.; Pushparajah, Shamini; Everett, Kerry R.; Taylor, Robert K.; Vinatzer, Boris A.; Pitman, Andrew R. (2019)Using multilocus sequence analysis to distinguish pathogenic from saprotrophic strains of Pseudomonas from stone fruit and kiwifruit.European Journal of Plant Pathology155(2)643-658. DOI: 10.1007/s10658-019-01799-8

Andersen, M. T.; Templeton, M. D.; Rees-George, J.; Vanneste, J. L.; Cornish, D. A.; Yu, J.; Cui, W.; Braggins, T. J.; Babu, K.; Mackay, J. F.; Rikkerink, E. H. A. (2018)Highly specific assays to detect isolates ofPseudomonas syringaepv.actinidiaebiovar 3 andPseudomonas syringaepv.actinidifoliorumdirectly from plant material.Plant Pathology67(5)1220-1230. DOI: 10.1111/ppa.12817

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Jayaraman, Jay; Jones, William T.; Harvey, Dawn; Hemara, Lauren M.; McCann, Honour C.; Yoon, Minsoo; Warring, Suzanne L.; Fineran, Peter C.; Mesarich, Carl H.; Templeton, Matthew D. (2020)Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the Pseudomonas syringae species complex.Environmental Microbiology22(12)5356-5372. DOI: 10.1111/1462-2920.15250

Culture events

Isolated:

Date:

01 January 1967 (Verbatim: 01 Jan 1967)

Deposited:

Note:

Derived from earliest batch date

Actioned by:

C. G. Panagopoulos (Reference number Al1)

Date:

01 June 1974 (Verbatim: 01 Jun 1974)

Transferred from:

Actioned by:

P. G. Psallidas

Duplicates

American Type Culture Collection: ATCC 33614

Direction:

Duplicate

Fera (UK): NCPPB 2607

Direction:

Duplicate

Belgian Coordinated Collections of Microorganisms: LMG 2123

Direction:

Duplicate

Assigned reference numbers

NZRCCNo:

NZRCC 10245

PDDCC:

PDDCC 3918

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice