Systematics Collections Data

ICMP 6614 – Neoascochyta paspali (P.R. Johnst.) Q. Chen & L. Cai 2015

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 6614
Type status:
ex Holotype
Culture type:
Fungal Culture
Database record added:
25 January 2002
Database record updated:
25 November 2021
Components
Primary component
Active identification
Determined name:
Phoma paspali P.R. Johnst.
Determiner:
Identification date:
Preferred name:
Neoascochyta paspali (P.R. Johnst.) Q. Chen & L. Cai 2015
Division:
Ascomycota
Class:
Dothideomycetes
Order:
Pleosporales
Family:
Didymellaceae
Identification type:
Determination
Note:
[PRJ, Jan 2016] Determination confirmed based on DNA sequences
Associations:
isolated from Paspalum dilatatum Poir.
Other identifications
Identification
Determined name:
Phoma paspali
Determiner:
Identification date:
Preferred name:
Neoascochyta paspali (P.R. Johnst.) Q. Chen & L. Cai 2015
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Paspalum dilatatum Poir.
Determiner:
Identification date:
Preferred name:
Paspalum dilatatum Poir.
Division:
Tracheophyta
Class:
Liliopsida
Order:
Poales
Family:
Gramineae
Vernacular name:
dallisgrass, paspalum
Identification type:
Determination
Part affected:
dead leaf
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Kaikohe
Georeferences:
Latitude and Longitude (WGS84):  -35.4075  173.799722 
Verbatim locality:
Kaikohe
Verbatim collector:
P.R. Johnston
Standardised collector:
Peter R. Johnston
Verbatim date:
Dec 1978
Start date:
1978-12
Country:
New Zealand
New Zealand Area Codes:
Northland
Culture flags
Price Category:
Category 1
External links
CIS - PDD:

PDD 39975

GenBank:

FJ427048 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

KT309745 - 28S ribosomal RNA

GU238124 - 28S ribosomal RNA

KT309957 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

GU238227 - 18S ribosomal RNA

KT309539 - tub2

KT309291 - act

FJ427158 - TUB

MH861378 - genomic DNA

MH873129 - large subunit ribosomal RNA

Literature:

Chen, Q.; Jiang, J.R.; Zhang, G.Z.; Cai, L.; Crous, P.W. (2015)Resolving the Phoma enigma.Studies in Mycology82(1)137-217. DOI: 10.1016/j.simyco.2015.10.003

Johnston, P. R.; Park, D.; Ho, W. W. H.; Alexander, B. J. R. (2017)Genetic validation of historical plant pathology records - a case study based on the fungal genus Phoma from the ICMP culture collection.Plant Pathology66(9)1424-1431. DOI: 10.1111/ppa.12728

Hou, L.W.; Groenewald, J.Z.; Pfenning, L.H.; Yarden, O.; Crous, P.W.; Cai, L. (2020)The phoma-like dilemma.Studies in Mycology96309-396. DOI: 10.1016/j.simyco.2020.05.001

Note: as CBS 560.81

Culture events
Isolated:
Actioned by:
Peter R. Johnston
Date:
01 December 1978 (Verbatim: Dec 1978)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Peter R. Johnston (Reference number 793)
Date:
01 October 1979 (Verbatim: 01 Oct 1979)
Duplicates
American Type Culture Collection: ATCC 60424
Direction:
Duplicate
Westerdijk Fungal Biodiversity Institute: CBS 560.81
Direction:
Sent
Assigned reference numbers
PDDCC:
PDDCC 6614
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice