Systematics Collections Data

ICMP 9505 – Pseudomonas kitaguniensis Sawada et al.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 9505
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
20 June 2023
Components
Primary component
Active identification
Determined name:
Pseudomonas kitaguniensis Sawada et al.
Determiner:
H. Sawada
Identification date:
2022-12-22 (Verbatim: 22 Dec 2022)
Preferred name:
Pseudomonas kitaguniensis Sawada et al.
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Determination
Note:
https://doi.org/10.1111/ppa.13690
Associations:
isolated from Actinidia deliciosa (Chev.) Liang & Ferguson
Other identifications
Identification
Determined name:
Pseudomonas marginalis (Brown 1918) Stevens 1925
Determiner:
Identification date:
Preferred name:
Pseudomonas marginalis (Brown 1918) Stevens 1925
Active:
no
Identification type:
Determination
Identification
Determined name:
Pseudomonas marginalis
Determiner:
Identification date:
Preferred name:
Pseudomonas marginalis (Brown 1918) Stevens 1925
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Actinidia deliciosa (Chev.) Liang & Ferguson
Determiner:
Identification date:
Preferred name:
Actinidia deliciosa (A.Chev.) C.F.Liang & A.R.Ferguson
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Ericales
Family:
Actinidiaceae
Vernacular name:
kiwifruit cv. Hayward
Identification type:
Determination
Part affected:
soft rot lesion of cool stored fruit
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Te Puke
Georeferences:
Latitude and Longitude (WGS84):  -37.787332  176.324791 
Verbatim locality:
Te Puke
Verbatim collector:
R.G. Clark
Standardised collector:
R. G. Clark
Verbatim date:
Sep 1987
Start date:
1987-09
Country:
New Zealand
New Zealand Area Codes:
Bay of Plenty
Culture flags
Price Category:
Category 1
Culture notes
Pathogenic to:
kiwifruit fruit
Characterised as:
LOPAT IVa
External links
GenBank:

LKGY00000000 - genomic DNA

PRJNA296726 - Pseudomonas marginalis ICMP 9505 Genome sequencing and assembly

PRJNA168286 - Pseudomonas marginalis ICMP 9505 Genome Sequencing

Literature:

Visnovsky, Sandra B.; Fiers, Mark; Lu, Ashley; Panda, Preetinanda; Taylor, Robert; Pitman, Andrew R. (2016) Draft Genome Sequences of 18 Strains of Pseudomonas Isolated from Kiwifruit Plants in New Zealand and Overseas .Genome Announcements4(2). DOI: 10.1128/genomeA.00061-16

Visnovsky, Sandra B.; Marroni, Maria V.; Pushparajah, Shamini; Everett, Kerry R.; Taylor, Robert K.; Vinatzer, Boris A.; Pitman, Andrew R. (2019)Using multilocus sequence analysis to distinguish pathogenic from saprotrophic strains of Pseudomonas from stone fruit and kiwifruit.European Journal of Plant Pathology155(2)643-658. DOI: 10.1007/s10658-019-01799-8

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Sawada, Hiroyuki; Fujikawa, Takashi; Satou, Mamoru (2023)Dismantling and reorganizing Pseudomonas marginalis sensu lato.Plant Pathology72(4)654-666. DOI: 10.1111/ppa.13690

Culture events
Isolated:
Date:
01 September 1987 (Verbatim: Sep 1987)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
R. G. Clark (Reference number D3678)
Date:
01 December 1987 (Verbatim: 01 Dec 1987)
Assigned reference numbers
PDDCC:
PDDCC 9505
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice