Systematics Collections Data

ICMP 6987 – Diaporthe foeniculina (Sacc.) Udayanga & Castl.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 6987
Culture type:
Fungal Culture
Database record added:
25 January 2002
Database record updated:
21 March 2019
Components
Primary component
Active identification
Determined name:
Diaporthe neotheicola A.J.L. Phillips & J.M. Santos 2009
Determiner:
P.R. Johnston
Identification date:
2012-11 (Verbatim: 11/2012)
Preferred name:
Diaporthe foeniculina (Sacc.) Udayanga & Castl.
Division:
Ascomycota
Class:
Sordariomycetes
Order:
Diaporthales
Family:
Diaporthaceae
Identification type:
Determination
Note:
redet based on ITS and EF1a sequence match to Udayanga et al., Fungal Diversity. 56: 157-171, 2012.
Associations:
isolated from Malus X domestica Borkh.
Other identifications
Identification
Determined name:
Phomopsis (Sacc.) Bubák
Determiner:
Identification date:
Preferred name:
Diaporthe Nitschke 1870
Active:
no
Identification type:
Determination
Identification
Determined name:
Phomopsis sp.
Determiner:
Identification date:
Preferred name:
Diaporthe Nitschke 1870
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Malus X domestica Borkh.
Determiner:
Identification date:
Preferred name:
Malus domestica
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Rosales
Family:
Rosaceae
Vernacular name:
apple
Identification type:
Determination
Part affected:
twig
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Motueka
Georeferences:
Latitude and Longitude (WGS84):  -41.123333  173.014722 
Verbatim locality:
Motueka
Verbatim collector:
Verbatim date:
Country:
New Zealand
New Zealand Area Codes:
Nelson
Culture flags
Price Category:
Category 1
External links
GenBank:

KC145894 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

KC145990 - genomic DNA

Literature:

Udayanga, D.; Castlebury, L.A.; Rossman, A.Y.; Hyde, K.D. (2014)Species limits in Diaporthe: molecular re-assessment of D. citri, D. cytosporella, D. foeniculina and D. rudis.Persoonia - Molecular Phylogeny and Evolution of Fungi32(1)83-101. DOI: 10.3767/003158514X679984

Culture events
Isolated:
Date:
01 July 1975 (Verbatim: 01 Jul 1975)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Gary J. Samuels (Reference number 75-209)
Date:
01 June 1980 (Verbatim: 01 Jun 1980)
Assigned reference numbers
PDDCC:
PDDCC 6987
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice