Systematics Collections Data

ICMP 5785 – Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 5785
Type status:
Type strain
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
02 October 2023
Components
Primary component
Active identification
Determined name:
Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn
Determiner:
Encarna Velázquez
Identification date:
2020 (Verbatim: 2020)
Preferred name:
Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn
Division:
Pseudomonadota
Class:
Alphaproteobacteria
Order:
Hyphomicrobiales
Family:
Rhizobiaceae
Identification type:
Determination
Note:
see Velázquez et al. 2020
Type status:
Type strain
Other identifications
Identification
Determined name:
Agrobacterium tumefaciens (Smith & Townsend 1907) Conn 1942
Determiner:
Identification date:
Preferred name:
Agrobacterium tumefaciens (Smith and Townsend 1907) Conn
Active:
no
Identification type:
Determination
Identification
Determined name:
Agrobacterium radiobacter
Determiner:
Identification date:
Preferred name:
Agrobacterium radiobacter (Beijerinck & van Delden 1902) Conn
Active:
no
Identification type:
Received as
Collection events
Primary collection event
Collection event type:
Field
Verbatim locality:
[Unknown]
Verbatim collector:
F. Lohnis
Standardised collector:
F. Löhnis
Verbatim date:
before 1925
Start date:
1925
Country:
Netherlands
Culture flags
MPI:
Restricted Culture
Price Category:
Category 2
Culture notes
Strain Data:
saprophytic strain
Other Details:
type strain of A. radiobacter
Characterised as:
Biovar 1
Growth Conditions:
Kings B or YNA @ 26 C for 3 days
External links
GenBank:

EU007408 - chvA

PRJNA613057

Note: as NCIB 9042

JAAQPQ000000000 - genomic DNA

Note: as NCIB 9042

MT534523 - 16S ribosomal RNA

Note: as NCIB 9042

MT547652 - recA

Note: as ATCC 19358

ASXY01000000

Note: as DSM 30147

PRJNA205087

Note: as DSM 30147

Literature:

Velázquez, Encarna; Flores-Félix, José David; Sánchez-Juanes, Fernando; Igual, José M.; Peix, Álvaro (2020)Strain ATCC 4720T is the authentic type strain of Agrobacterium tumefaciens, which is not a later heterotypic synonym of Agrobacterium radiobacter . International Journal of Systematic and Evolutionary Microbiology 70(9)5172-5176. DOI: 10.1099/ijsem.0.004443

Note: this strain is the type of Agrobacterium radiobacter (ATCC 19358)

Young, J. M.; Dye, D. W.; Bradbury, J. F.; Panagopoulos, C. G.; Robbs, C. F. (1978)A proposed nomenclature and classification for plant pathogenic bacteria.New Zealand Journal of Agricultural Research21(1)153-177. DOI: 10.1080/00288233.1978.10427397

Note: as PDDCC 5785

Culture events
Deposited:
Actioned by:
Allen Kerr
Date:
01 October 1977 (Verbatim: October 1977)
Transferred via:
Actioned by:
NCIB (Reference number NCIB 9042)
Transferred from:
Note:
Laboratory of Microbiology and Enzymology (LMD), Julianalaan 67A, Delft 2628BC, The Netherlands
Actioned by:
M. W. Beijerinck (Reference number L.624 E.X.3.24.2 )
Date:
01 October 1959 (Verbatim: before Oct 1959)
Isolated:
Actioned by:
F. Löhnis
Date:
before 1925 (Verbatim)
Duplicates
American Type Culture Collection: ATCC 19358
Direction:
Duplicate
Fera (UK): NCPPB 3001
Direction:
Duplicate
NZRM: NZRM 3000
Direction:
Duplicate
NCIMB: NCIMB 9042
Direction:
Received
DSMZ: DSM 30147
Direction:
Duplicate
Assigned reference numbers
NZRCCNo:
NZRCC 10201
PDDCC:
PDDCC 5785
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice