Specimen Details

ICMP 3870 – Stagonosporopsis loticola (Died.) Aveskamp, Gruyter & Verkley

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 3870

Culture type:

Fungal Culture

Database record added:

25 January 2002

Database record updated:

09 September 2020

Components

Primary component

Active identification

Determined name:

Stagonosporopsis loticola (Died.) Aveskamp, Gruyter & Verkley

Determiner:

P.R. Johnston

Identification date:

2016-01 (Verbatim: Jan 2016)

Preferred name:

Stagonosporopsis loticola (Died.) Aveskamp, Gruyter & Verkley

Division:

Ascomycota

Class:

Dothideomycetes

Order:

Pleosporales

Family:

Didymellaceae

Identification type:

Determination

Note:

Redetermination based on DNA sequences

Associations:

isolated from Lotus tenuis Waldst. & Kit. ex Willd.

Other identifications

Identification

Determined name:

Phoma lotivora P.R. Johnst.

Determiner:

Identification date:

Preferred name:

Stagonosporopsis loticola (Died.) Aveskamp, Gruyter & Verkley

Active:

Identification type:

Determination

Identification

Determined name:

Phoma lotivora

Determiner:

Identification date:

Preferred name:

Stagonosporopsis loticola (Died.) Aveskamp, Gruyter & Verkley

Active:

Identification type:

Received as

Other components

Active identification

Determined name:

Lotus tenuis Waldst. & Kit. ex Willd.

Determiner:

Identification date:

Preferred name:

Lotus tenuis Willd.

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Fabales

Family:

Leguminosae

Vernacular name:

narrow-leaf birdsfoot trefoil

Identification type:

Determination

Part affected:

stem black rot

Present:

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Aokautere

Georeferences:

Latitude and Longitude (WGS84): -40.36 175.66

Verbatim locality:

Aokautere

Verbatim collector:

G.F. Laundon

Standardised collector:

Gillian F. Laundon

Verbatim date:

Nov 1973

Start date:

1973-11

Country:

New Zealand

New Zealand Area Codes:

Wellington

Culture flags

Price Category:

Category 1

External links

CIS - PDD:

PDD 39972

GenBank:

KT309929 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

KT309265 - act

GU238193 - 28S ribosomal RNA

GU237896 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

KT309719 - 28S ribosomal RNA

Literature:

Johnston, P. R.; Park, D.; Ho, W. W. H.; Alexander, B. J. R. (2017)Genetic validation of historical plant pathology records - a case study based on the fungal genus Phoma from the ICMP culture collection.Plant Pathology66(9)1424-1431. DOI: 10.1111/ppa.12728

Hou, L.W.; Groenewald, J.Z.; Pfenning, L.H.; Yarden, O.; Crous, P.W.; Cai, L. (2020)The phoma-like dilemma.Studies in Mycology96309-396. DOI: 10.1016/j.simyco.2020.05.001

Culture events

Isolated:

Date:

01 November 1973 (Verbatim: 01 Nov 1973)

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Gillian F. Laundon (Reference number LEV 7554)

Date:

01 April 1974 (Verbatim: 01 Apr 1974)

Duplicates

Westerdijk Fungal Biodiversity Institute: CBS 628.97

Direction:

Sent

Assigned reference numbers

PDDCC:

PDDCC 3870

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice