Systematics Collections Data

ICMP 3353 – Pseudomonas cichorii (Swingle 1925) Stapp

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 3353
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
27 October 2023
Components
Primary component
Active identification
Determined name:
Pseudomonas cichorii (Swingle 1925) Stapp 1928
Determiner:
Identification date:
Preferred name:
Pseudomonas cichorii (Swingle 1925) Stapp
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Determination
Associations:
isolated from Lycopersicon esculentum Mill.
Other identifications
Identification
Determined name:
Pseudomonas syringae
Determiner:
Identification date:
Preferred name:
Pseudomonas cichorii (Swingle 1925) Stapp
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Lycopersicon esculentum Mill.
Determiner:
Identification date:
Preferred name:
Solanum lycopersicum L.
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Solanales
Family:
Solanaceae
Vernacular name:
tomato
Identification type:
Determination
Part affected:
fruit lesion
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Nelson
Georeferences:
Latitude and Longitude (WGS84):  -41.270833  173.283889 
Verbatim locality:
Nelson
Verbatim collector:
N.L. Baigent
Standardised collector:
Nancy L. Baigent
Verbatim date:
Feb 1963
Start date:
1963-02
Country:
New Zealand
New Zealand Area Codes:
Nelson
Culture flags
Price Category:
Category 1
Culture notes
Pathogenic to:
celery, chicory, chrysanthemum, tomato
Characterised as:
LOPAT III
External links
GenBank:

RBRE00000000 - genomic DNA

PRJNA292453 - Pseudomonas Genome sequencing and assembly

Literature:

Zhao, Mei; Koirala, Santosh; Chen, Hsiao-Chun; Gitaitis, Ronald; Kvitko, Brian; Dutta, Bhabesh (2021) Pseudomonas capsici sp. nov., a plant-pathogenic bacterium isolated from pepper leaf in Georgia, USA. International Journal of Systematic and Evolutionary Microbiology 71(8). DOI: 10.1099/ijsem.0.004971

Iiyama, Kazuhiro; Tani, Sayo; Yagi, Haruka; Hashimoto, Sara; Suga, Yasuhiro; Tsuchiya, Kenichi; Furuya, Naruto (2021)d-Tartrate utilization correlates with phylogenetic subclade inPseudomonas cichorii.FEMS Microbiology Letters368(2). DOI: 10.1093/femsle/fnaa223

Note: does NOT have tarD and dctA gene homologs for d-tartrate utilisation. Compare ICMP 6917 which does

Culture events
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Joan P. WilkieJoan P. Wilkie (Reference number PP15)
Date:
01 March 1973 (Verbatim: 01 Mar 1973)
Isolated:
Actioned by:
Nancy L. Baigent (Reference number P187)
Date:
01 February 1963 (Verbatim: Feb 1963)
Assigned reference numbers
PDDCC:
PDDCC 3353
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice