Systematics Collections Data

ICMP 3272 – Pseudomonas Migula 1894

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 3272
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
03 March 2021
Components
Primary component
Active identification
Determined name:
Pseudomonas Migula 1894
Determiner:
Identification date:
Preferred name:
Pseudomonas Migula 1894
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Determination
Associations:
isolated from Actinidia deliciosa (Chev.) Liang & Ferguson
Other identifications
Identification
Determined name:
Pseudomonas viridiflava (Burkholder 1930) Dowson 1939
Determiner:
Identification date:
Preferred name:
Pseudomonas viridiflava (Burkholder 1930) Dowson 1939
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Actinidia deliciosa (Chev.) Liang & Ferguson
Determiner:
Identification date:
Preferred name:
Actinidia deliciosa (A.Chev.) C.F.Liang & A.R.Ferguson
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Ericales
Family:
Actinidiaceae
Vernacular name:
kiwifruit
Identification type:
Determination
Part affected:
necrotic flower bud
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Riverhead Forest
Georeferences:
Latitude and Longitude (WGS84):  -36.715156  174.579782 
Verbatim locality:
Riverhead
Verbatim collector:
J.P. Wilkie
Standardised collector:
Joan P. Wilkie
Verbatim date:
Nov 1971
Start date:
1971-11
Country:
New Zealand
New Zealand Area Codes:
Auckland
Culture flags
Price Category:
Category 1
Culture notes
Pathogenic to:
bean, cucumber, kiwifruit, lettuce, passionfruit, pea, peach, tomato
Characterised as:
LOPAT II
External links
GenBank:

LKEK00000000 - genomic DNA

GU058934 - cts

GU058944 - pgi

GU058953 - rpoD

GU058960 - acnB

PRJNA296739 - Pseudomonas sp. ICMP 3272 Genome sequencing and assembly

PRJNA168274 - Pseudomonas sp. ICMP 3272 Genome sequencing

RBQZ00000000 - genomic DNA

PRJNA292453 - Pseudomonas Genome sequencing and assembly

KU161333 - dnaX

Literature:

Visnovsky, Sandra B.; Fiers, Mark; Lu, Ashley; Panda, Preetinanda; Taylor, Robert; Pitman, Andrew R. (2016) Draft Genome Sequences of 18 Strains of Pseudomonas Isolated from Kiwifruit Plants in New Zealand and Overseas .Genome Announcements4(2). DOI: 10.1128/genomeA.00061-16

Visnovsky, Sandra B.; Marroni, Maria V.; Pushparajah, Shamini; Everett, Kerry R.; Taylor, Robert K.; Vinatzer, Boris A.; Pitman, Andrew R. (2019)Using multilocus sequence analysis to distinguish pathogenic from saprotrophic strains of Pseudomonas from stone fruit and kiwifruit.European Journal of Plant Pathology155(2)643-658. DOI: 10.1007/s10658-019-01799-8

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Jayaraman, Jay; Jones, William T.; Harvey, Dawn; Hemara, Lauren M.; McCann, Honour C.; Yoon, Minsoo; Warring, Suzanne L.; Fineran, Peter C.; Mesarich, Carl H.; Templeton, Matthew D. (2020)Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the Pseudomonas syringae species complex.Environmental Microbiology22(12)5356-5372. DOI: 10.1111/1462-2920.15250

Culture events
Isolated:
Date:
01 November 1971 (Verbatim: 01 Nov 1971)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Joan P. WilkieJoan P. Wilkie (Reference number A1210)
Date:
01 January 1983 (Verbatim: 01 Jan 1983)
Assigned reference numbers
NZRCCNo:
NZRCC 10622
PDDCC:
PDDCC 3272
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice