Systematics Collections Data

ICMP 2807 – Robbsia andropogonis (Smith 1911) Lopes-Santos et al.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 2807
Type status:
Type strain
Culture type:
Bacterial Culture
Database record added:
25 January 2002
Database record updated:
27 October 2020
Components
Primary component
Active identification
Determined name:
Robbsia andropogonis Lopes-Santos et al.
Determiner:
B.S. Weir
Identification date:
2017-02-15 (Verbatim: 15 Feb 2017)
Preferred name:
Robbsia andropogonis (Smith 1911) Lopes-Santos et al.
Division:
Pseudomonadota
Class:
Betaproteobacteria
Order:
Burkholderiales
Family:
Burkholderiaceae
Identification type:
Determination
Type status:
Type strain
Associations:
isolated from Sorghum bicolor (L.) Moench
Other identifications
Identification
Determined name:
Burkholderia andropogonis (Smith 1911) Gillis et al. 1995
Determiner:
Identification date:
Preferred name:
Robbsia andropogonis (Smith 1911) Lopes-Santos et al.
Active:
no
Identification type:
Determination
Type status:
Type strain
Identification
Determined name:
Burkholderia andropogonis
Determiner:
Identification date:
Preferred name:
Robbsia andropogonis (Smith 1911) Lopes-Santos et al.
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Sorghum bicolor (L.) Moench
Determiner:
Identification date:
Preferred name:
Sorghum bicolor (L.) Moench
Division:
Tracheophyta
Class:
Liliopsida
Order:
Poales
Family:
Gramineae
Vernacular name:
sorghum
Identification type:
Determination
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Verbatim locality:
[Unknown]
Verbatim collector:
A.J. Ullstrup
Standardised collector:
A. J. Ullstrup
Verbatim date:
1959
Start date:
1959
Country:
United States
Culture flags
MPI:
Restricted Culture
Price Category:
Category 2
Culture notes
Pathogenic to:
sorghum
Characterised as:
Identity confirmed by sequencing
D. Park, 12 Dec 2013
External links
GenBank:

LAQU00000000 - genomic DNA

Note: genome sequence

KM083264 - 16S ribosomal RNA

PRJNA279601 - Robbsia andropogonis strain:ICMP2807 Genome sequencing and assembly

PRJDB10667

MT758035 - 16S ribosomal RNA

MT759998 - 16S ribosomal RNA

Literature:

Hale, C. N.; Paula Wilkie, J. (1972)A comparative study ofPseudomonasspecies pathogenic to sorghum.New Zealand Journal of Agricultural Research15(3)448-456. DOI: 10.1080/00288233.1972.10430534

Lopes-Santos, Lucilene; Castro, Daniel Bedo Assumpção; Ottoboni, Laura Maria Mariscal; Park, Duckchul; Weir, Bevan Simon; Destéfano, Suzete Aparecida Lanza (2015)Draft Genome Sequence of Burkholderia andropogonis Type Strain ICMP2807, Isolated from Sorghum bicolor.Genome Announcements3(3). DOI: 10.1128/genomeA.00455-15

Note: genome sequence release publication

Ramundo, Bruce A.; Claflin, Larry E. (2005)Identification of Burkholderia andropogonis with a Repetitive Sequence BOX Element and PCR.Current Microbiology50(1)52-56. DOI: 10.1007/s00284-004-4354-z

Bagsic, R.D.; Fegan, M.; Li, X.; Hayward, A.C. (1995)Construction of species-specific primers for Pseudomonas andropogonis based on 16S rDNA sequences.Letters in Applied Microbiology21(2)87-92. DOI: 10.1111/j.1472-765X.1995.tb01013.x

Oren, Aharon; Garrity, George M. (2015)List of new names and new combinations previously effectively, but not validly, published. International Journal of Systematic and Evolutionary Microbiology 65(Pt_7)2017-2025. DOI: 10.1099/ijs.0.000317

Note: publication renaming to Paraburkholderia andropogonis

Coenye, T; Laevens, S; Gillis, M; Vandamme, P (2001)Genotypic and chemotaxonomic evidence for the reclassification of Pseudomonas woodsii (Smith 1911) Stevens 1925 as Burkholderia andropogonis (Smith 1911) Gillis et al. 1995. International Journal of Systematic and Evolutionary Microbiology 51(1)183-185. DOI: 10.1099/00207713-51-1-183

Lopes-Santos, Lucilene; Castro, Daniel Bedo Assumpção; Ferreira-Tonin, Mariana; Corrêa, Daniele Bussioli Alves; Weir, Bevan Simon; Park, Duckchul; Ottoboni, Laura Maria Mariscal; Neto, Júlio Rodrigues; Destéfano, Suzete Aparecida Lanza (2017)Reassessment of the taxonomic position of Burkholderia andropogonis and description of Robbsia andropogonis gen. nov., comb. nov.Antonie van Leeuwenhoek110(6)727-736. DOI: 10.1007/s10482-017-0842-6

Note: publication renaming to Robbsia andropogonis

Culture events
Isolated:
Date:
1959 (Verbatim)
Deposited:
Note:
Derived from earliest batch date
Actioned by:
Douglas W. Dye (Reference number NG2)
Date:
01 August 1970 (Verbatim: 01 Aug 1970)
Transferred via:
Actioned by:
National Collection of Plant Pathogenic Bacteria (Reference number NCPPB 934)
Transferred from:
Actioned by:
A. J. Ullstrup
Duplicates
French Collection for Plant-associated Bacteria: CFBP 2421
Direction:
Duplicate
Belgian Coordinated Collections of Microorganisms: LMG 2129
Direction:
Duplicate
American Type Culture Collection: ATCC 23061
Direction:
Duplicate
Biological Institute Culture Collection of Phytopathogenic Bacteria: IBSBF 199
Direction:
Duplicate
Assigned reference numbers
NZRCCNo:
NZRCC 10246
PDDCC:
PDDCC 2807
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice