Specimen Details

ICMP 25025 – Stenotrophomonas aracearum Chuang et al.

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 25025

Type status:

Type strain

Culture type:

Bacterial Culture

Database record added:

13 July 2023

Database record updated:

15 June 2025

Components

Primary component

Active identification

Determined name:

Stenotrophomonas aracearum Chuang et al.

Determiner:

Mohammad Arif

Identification date:

Preferred name:

Stenotrophomonas aracearum Chuang et al.

Division:

Pseudomonadota

Class:

Gammaproteobacteria

Order:

Lysobacterales

Family:

Lysobacteraceae

Identification type:

Determination

Note:

Multi Locus Sequence Analysis, Next Generation Sequencing

Type status:

Type strain

Associations:

isolated from Anthurium

Other components

Active identification

Determined name:

Anthurium

Determiner:

Identification date:

Preferred name:

Anthurium

Division:

Tracheophyta

Class:

Liliopsida

Order:

Alismatales

Family:

Araceae

Identification type:

Determination

Part affected:

Leaf

Collection events

Primary collection event

Collection event type:

Unknown

Standard locality

Location:

Oahu, Hawaii

Georeferences:

Latitude and Longitude (WGS84): 21.4390774159404 -157.99958491448194 (WGS84 21.439077 -157.999585)

Verbatim locality:

Oahu, Hawaii

Verbatim collector:

Anne Alvarez

Standardised collector:

Anne M. Alvarez

Verbatim date:

02 Jul 1981

Start date:

1981-07-02

Country:

United States

Culture flags

Price Category:

Category 2

MPI:

Restricted Culture

Culture notes

Characterised as:

Dark yellow colony of YDC

Growth Conditions:

Grows optimally at 28 degrees C on yeast dextrose calcium carbomate (YDC) agar. Isolated using 2, 3, 5-triphenyltetrazolium chloride (TZC) Medium

External links

GenBank:

OP964728 - 16S ribosomal RNA

CP115543 - dnaA, dnaN, recF, gyrB, exbB, cls, ureC, ureA, ureG, cobS, ligD, eda, kduI, kduD, phhA, mutM, pyrF, plsB, ttcA, gltB, glnA, amt, ntrC, secB, pnuC, trmL, ubiB, arfB, dcp, lepB, aceB, aceA, zapE, purU, metE, mmsB, dusA, birA, rocF, yedA, rarD, argS, radC, coaBC, dut, kdpC, kdpB, kdpA, pyrE, tyrS, rrf, putA, coxB, ctaD, cyoE, dnaG, rpsU, tsaD, folB, glnE, aceE, dmeF, motB, motA, msrB, alr, fabB, fabA, dinB, gph, btuB, bioD, msrA, queD, maiA, rfbB, rfbA, rfbC, rfbD, glmS, pssA, rimI, lptF, lptG, xerD, purL, gspE, gspG, gspM, gspD, pncB, ettA, nrdR, ribD, ribB, ribH, nusB, thiL, rsmI, rnpB, mraZ, rsmH, ftsL, murF, mraY, ftsW, murG, murC, ftsA, ftsZ, lpxC, secA, metF, ybaK, ahcY, ppc, metK, dusB, lgt, apaG, rsmA, pdxA, lptD, ubiH, rlmM, rnk, ahpF, ahpC, prmC, pip, sufT, wrbA, ppk2, prfA, hemA, lolB, ispE, pth, ychF, tuf, secE, nusG, rplK, rplA, rplJ, rplL, rpoB, rpoC, rpsL, rpsG, fusA, rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV, rpsC, rplP, rpmC, rpsQ, rplN, rplX, rplE, rpsN, rpsH, rplF, rplR, rpsE, rpmD, rplO, secY, rpsM, rpsK, rpsD, rpoA, rplQ, typA, prpE, kbl, tdh, folC, purF, lpxH, ppx, ppk1, phoR, phoB, grxC, tig, clpP, clpX, lon, gloB, rnhA, dnaQ, ffs, dnaX, recR, rpmF, fabD, fabG, acpP, fabF, mltG, tmk, soxR, proC, ruvX, mgtE, ptsP, rapZ, hprK, raiA, lptB, lptA, lptC, murA, purN, purM, hda, sufD, sufC, sufB, murL, murD, mqo, minE, minD, minC, purT, tesB, uvrA, rplU, rpmA, obgE, rpsT, murJ, ileS, lspA, ispH, treA, cyoA, cyoB, cyoC, cyoD, radA, ccsA, ffh, rpsP, rimM, trmD, rplS, katG, mutS, fabR, gpmA, mfd, rlmJ, creB, creC, creD, gltX, ubiM, smrA, phaZ, dnaE, lpxB, lpxA, fabZ, lpxD, bamA, rseP, dxr, uppS, frr, pyrH, tsf, rpsB, map, dapD, dapE, asnB, bfr, parC, emrA, rnr, rlmB, rnt, phoU, pstB, pstA, pstC, pstS, nth, rlmKL, potA, ybeY, miaB, petA, nadC, purE, grxD, ppnN, pilV, uvrB, msbA, lpxK, kdsB, uvrC, pgsA, hemN, parE, eno, ftsB, ispD, ispF, truD, surE, yhbY, rlmE, ftsH, folP, miaA, hfq, hflX, lexA, recA, recX, alaS, csrA, thiD, dapA, pcnB, folK, panB, panC, pgi, ispG, edd, pgl, glk, zwf, ugpC, sdhC, sdhD, sdhA, lolD, mutY, ftsY, htpG, rsmD, coaD, ggt, upp, ssrA, smpB, bamE, fur, recN, hrcA, grpE, dnaK, dnaJ, pdxY, queA, tgt, yajC, secD, secF, dbpA, ykgO, cmk, rpsA, lapB, galU, ndk, rlmN, pilW, bamB, der, moeB, folD, guaB, guaA, murB, kdsA, thrA, thrC, hisS, hisG, hisD, hisC, hisB, hisH, hisA, hisF, hisIE, fucP, mtnC, serA, yeiP, feoB, dapB, carA, carB, greA, recJ, prfB, lysS, acnA, acnB, cheD, motD, cheY, flhF, flhA, flhB, fliR, fliP, fliO, fliN, fliM, fliJ, fliG, fliF, fliE, rpoN, fliS, fliD, flgL, flgK, flgJ, flgH, flgG, flgE, flgD, flgC, flgB, flgA, flgM, hflD, mnmA, clpS, clpA, infA, aat, trxB, lolA, crcB, moaA, moaCB, modA, modB, arcA, lpdA, merR, merT, merP, merA, arsC, arsH, arsB, copD, copC, copL, nudE, groL, pnp, cfa, ltaE, betT, xylA, xylB, paoA, glgX, treY, treZ, glgB, glgA, xth, proP, atpC, cpaB, lldD, imuA, adiC, dsbG, phaC, phaE, ppsA, orn, tadA, mntR, virB11, umuD, serS, aroA, pheA, serC, hutC, hutI, hutH, hutG, gyrA, mtnA, epmA, ligA, zipA, smc, rplI, rpsR, rpsF, asnS, can, kynU, sbcB, metH, purB, sucB, zupT, rne, scpB, ccmA, ccmB, ccmC, ccmD, ccmE, cydC, cydD, cydB, cydX, pgaA, pgaB, pgaC, pgaD, proB, argH, argC, cysS, dksA, yidD, ubiG, efp, epmB, htpX, gluQRS, phaR, mutL, tsaE, queG, xseA, rnd, dxs, pheT, pheS, rplT, rpmI, infC, thrS, rpsO, truB, rbfA, infB, nusA, rimP, nuoN, nuoL, nuoK, nuoI, nuoH, nuoG, nuoF, nuoE, secG, tpiA, glmM, accD, trpA, trpB, truA, aroC, prmB, asd, greB, rimO, dcd, apbC, gorA, tilS, pmbA, tldD, rng, rlmH, rsfS, nadD, holA, lptE, leuS, trxA, sctJ, sctI, sctE, sctT, sctS, sctW, sctC, metG, rnfB, mprF, pdeM, nagZ, rlmD, recO, era, rnc, lepA, rpoE, aqpZ, gcvP, hflK, pilH, pbpC, prpF, acnD, prpC, prpB, prpR, pdxH, aroB, hemE, mdtD, mtgA, gcvH, gcvT, mazG, cysQ, bioA, pilG, gshB, tsaB, mrcB, hrpA, recQ, queC, queE, ybgF, pal, tolB, tolA, tolR, tolQ, ybgC, ruvB, ruvA, ruvC, aspS, ggpS, blaL2, ybaL, clpB, otsB, otsA, pgeF, rluD, sucD, sucC, pilB, coaE, rimK, thiS, trmB, mscL, cysK, pyk, gap, tkt, pilO, recG, rpoZ, gmk, rph, rdgB, hemW, pepQ, ssrS, rpiA, thiE, hemL, azu, mpl, ppa, thiC, ilvC, ilvG, leuC, leuD, leuB, waaA, phbB, rsgA, fghA, yihA, betB, betA, fhuE, nagA, gnd, lipA, lipB, mltB, rodA, mrdA, mreD, mreC, ubiE, smeE, smeD, hslU, hslV, xerC, dapF, gloA, glmU, atpD, atpG, atpA, atpE, atpB, aceF, glpD, glpK, hemC, mdoH, rpoD, dtd, ribA, rsmB, fmt, def, dprA, sppA, aroQ, accB, accC, prmA, fis, purH, purD, rpoH, ung, ftsX, ftsE, rhlB, rho, aceK, queF, yccS, ampE, nudC, erpA, rpsI, rplM, coq7, speD, crp, trpC, trpD, trpE, yegS, rpe, hmgA, hppD, pdhA, speA, speE, yidA, ubiA, bioB, bioF, bioH, bioC, mnmG, ilvD, dinG, aroE, hemB, panE, hrpB, dkgB, hemF, polA, uvrD, rpmG, rpmB, rsmG, acs, glyS, glyQ, tatC, tatB, tatA, hemH, egtD, egtB, folE, recD, recC, mlaD, leuE, mnmE, yidC, rnpA, rpmH

Literature:

Chuang, Shu-Cheng; Dobhal, Shefali; Alvarez, Anne M.; Arif, Mohammad (2024)Three new species, Xanthomonas hawaiiensis sp. nov., Stenotrophomonas aracearum sp. nov., and Stenotrophomonas oahuensis sp. nov., isolated from the Araceae family.Frontiers in Microbiology15. DOI: 10.3389/fmicb.2024.1356025

Culture events

Deposited:

Actioned by:

Mohammad Arif

Date:

10 July 2023 (Verbatim: 10 Jul 2023)

Isolated:

Actioned by:

Anne M. Alvarez (Reference number A5588 (D-61-1L))

Date:

02 July 2023 (Verbatim: 02 Jul 2023)

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice