Systematics Collections Data

ICMP 23426 – Xanthomonas sontii Bansal et al.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 23426
Type status:
Type strain
Culture type:
Bacterial Culture
Database record added:
03 July 2019
Database record updated:
11 May 2023
Components
Primary component
Active identification
Determined name:
Xanthomonas sontii Bansal et al.
Determiner:
Kanika Bansal
Determiners reference no.:
1
Identification date:
2018-01-10 (Verbatim: 10 Jan 2018)
Preferred name:
Xanthomonas sontii Bansal et al.
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Lysobacterales
Family:
Lysobacteraceae
Identification type:
Received as
Type status:
Type strain
Associations:
isolated from Oryza sativa L.
Other components
Active identification
Determined name:
Oryza sativa L.
Determiner:
Identification date:
Preferred name:
Oryza sativa L.
Division:
Tracheophyta
Class:
Liliopsida
Order:
Poales
Family:
Gramineae
Vernacular name:
Rice seeds (Basmati)
Identification type:
Determination
Part affected:
Rice seeds
Collection events
Primary collection event
Collection event type:
Unknown
Standard locality
Location:
Fazilka, Punjab, India
Georeferences:
Latitude and Longitude (WGS84):  30.403683  74.030038 
Verbatim locality:
Fazilka, Punjab, India
Verbatim collector:
Samriti Midha
Standardised collector:
Samriti Midha
Collectors reference no.:
1
Verbatim date:
15 Sep 2012
Start date:
2012-09-15
Country:
India
Georeferences:
Latitude and Longitude (WGS84):  30.4036  74.0280 
Culture flags
Price Category:
Category 2
MPI:
Restricted Culture
Culture notes
Characterised as:
Genomotaxonomy, Biochemical, FAME
Growth Conditions:
GYCA, 28oC for 24 hours
Avirulent to:
Rice plants. No pathogenic strain
External links
GenBank:

NQYO00000000 - genomic DNA

PRJNA398593 - Whole genome sequencing of non-pathogenic Xanthomonas strains isolated from Oryza sativa

Literature:

Bansal, Kanika; Kaur, Amandeep; Midha, Samriti; Kumar, Sanjeet; Korpole, Suresh; Patil, Prabhu B. (2019)Xanthomonas sontii sp. nov., a non-pathogenic bacterium isolated from healthy basmati rice (Oryza sativa) seeds from India. DOI: 10.1101/738047

Bansal, Kanika; Kaur, Amandeep; Midha, Samriti; Kumar, Sanjeet; Korpole, Suresh; Patil, Prabhu B. (2021)Xanthomonas sontii sp. nov., a non-pathogenic bacterium isolated from healthy basmati rice (Oryza sativa) seeds from India.Antonie van Leeuwenhoek114(11)1935-1947. DOI: 10.1007/s10482-021-01652-1

Culture events
Deposited:
Actioned by:
Kanika BansalSamriti MidhaAmandeep KaurSanjeet KumarPrabhu B. Patil (Reference number 5)
Date:
28 June 2019 (Verbatim: 28 Jun 2019)
Isolated:
Actioned by:
Samriti Midha
Date:
15 September 2012 (Verbatim: 15 Sep 2012)
Duplicates
MTCC: 12941
Direction:
Duplicate
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice