Systematics Collections Data

ICMP 21873 – Pseudomonas putida (Trevisan 1889) Migula

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 21873
Culture type:
Bacterial Culture
Database record added:
26 January 2018
Database record updated:
03 March 2021
Components
Primary component
Active identification
Determined name:
Pseudomonas putida (Trevisan 1889) Migula
Determiner:
Sandra Visnovsky
Determiners reference no.:
NZIPFR-ABAC8
Identification date:
Preferred name:
Pseudomonas putida (Trevisan 1889) Migula
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Received as
Associations:
isolated from Actinidia
Other components
Active identification
Determined name:
Actinidia
Determiner:
Identification date:
Preferred name:
Actinidia
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Ericales
Family:
Actinidiaceae
Vernacular name:
Kiwifruit
Identification type:
Determination
Part affected:
Leaf
Collection events
Primary collection event
Collection event type:
Unknown
Standard locality
Location:
New Zealand
Georeferences:
Latitude and Longitude (WGS84):  -42  174   (WGS84 -42. 174.)
Verbatim locality:
New Zealand
Verbatim collector:
Joel Vanneste
Standardised collector:
Joel L. Vanneste
Collectors reference no.:
ABAC8
Verbatim date:
2011
Start date:
2011
Country:
New Zealand
New Zealand Area Codes:
New Zealand
Culture flags
Price Category:
Category 1
Culture notes
Characterised as:
wgs
Avirulent to:
Actinidia chinensis, A deliciosa
External links
GenBank:

LKGZ00000000 - genomic DNA

PRJNA296832 - Pseudomonas putida strain:ABAC8 Genome sequencing and assembly

Literature:

Visnovsky, Sandra B.; Marroni, Maria V.; Pushparajah, Shamini; Everett, Kerry R.; Taylor, Robert K.; Vinatzer, Boris A.; Pitman, Andrew R. (2019)Using multilocus sequence analysis to distinguish pathogenic from saprotrophic strains of Pseudomonas from stone fruit and kiwifruit.European Journal of Plant Pathology155(2)643-658. DOI: 10.1007/s10658-019-01799-8

Visnovsky, Sandra B.; Fiers, Mark; Lu, Ashley; Panda, Preetinanda; Taylor, Robert; Pitman, Andrew R. (2016) Draft Genome Sequences of 18 Strains of Pseudomonas Isolated from Kiwifruit Plants in New Zealand and Overseas .Genome Announcements4(2). DOI: 10.1128/genomeA.00061-16

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Culture events
Isolated:
Actioned by:
Joel Fanneste
Date:
2011 (Verbatim)
Deposited:
Actioned by:
S. Visnovsky
Date:
25 January 2018 (Verbatim: 25 Jan 2018)
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice