Systematics Collections Data

ICMP 19498 – Pseudomonas syringae van Hall 1902

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 19498
Culture type:
Bacterial Culture
Database record added:
05 July 2012
Database record updated:
03 March 2021
Components
Primary component
Active identification
Determined name:
Pseudomonas syringae van Hall 1902
Determiner:
S. Visnovsky
Determiners reference no.:
230611-9-SBV
Identification date:
2011-07-08 (Verbatim: 8/7/2011)
Preferred name:
Pseudomonas syringae van Hall 1902
Division:
Pseudomonadota
Class:
Gammaproteobacteria
Order:
Pseudomonadales
Family:
Pseudomonadaceae
Identification type:
Determination
Associations:
isolated from Actinidia chinensis Planch.
Other components
Active identification
Determined name:
Actinidia chinensis Planch.
Determiner:
Identification date:
Preferred name:
Actinidia chinensis Planch.
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Ericales
Family:
Actinidiaceae
Vernacular name:
Kiwifruit cv. Hort 16a
Identification type:
Determination
Part affected:
Leaf spot
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Te Puke
Georeferences:
Latitude and Longitude (WGS84):  -37.787332  176.324791 
Verbatim locality:
Te Puke
Verbatim collector:
R. Taylor
Standardised collector:
Robert K. Taylor
Verbatim date:
Nov 2010
Start date:
2010-11
Country:
New Zealand
New Zealand Area Codes:
Bay of Plenty
Culture flags
Price Category:
Category 1
Culture notes
Characterised as:
Identified by 16S rDNA sequencing
S. Visnovsky
External links
GenBank:

LKCH00000000 - genomic DNA

PRJNA295866 - Pseudomonas syringae ICMP 19498 Genome sequencing and assembly

PRJNA170154 - Pseudomonas syringae ICMP 19498 Genome Sequencing

Literature:

Visnovsky, Sandra B.; Fiers, Mark; Lu, Ashley; Panda, Preetinanda; Taylor, Robert; Pitman, Andrew R. (2016) Draft Genome Sequences of 18 Strains of Pseudomonas Isolated from Kiwifruit Plants in New Zealand and Overseas .Genome Announcements4(2). DOI: 10.1128/genomeA.00061-16

Visnovsky, Sandra B.; Marroni, Maria V.; Pushparajah, Shamini; Everett, Kerry R.; Taylor, Robert K.; Vinatzer, Boris A.; Pitman, Andrew R. (2019)Using multilocus sequence analysis to distinguish pathogenic from saprotrophic strains of Pseudomonas from stone fruit and kiwifruit.European Journal of Plant Pathology155(2)643-658. DOI: 10.1007/s10658-019-01799-8

Visnovsky, Sandra B.; Panda, Preeti; Everett, Kerry R.; Lu, Ashley; Butler, Ruth C.; Taylor, Robert K.; Pitman, Andrew R. (2020)A PCR diagnostic assay for rapid detection of plant pathogenic pseudomonads.Plant Pathology69(7)1311-1330. DOI: 10.1111/ppa.13204

Jayaraman, Jay; Jones, William T.; Harvey, Dawn; Hemara, Lauren M.; McCann, Honour C.; Yoon, Minsoo; Warring, Suzanne L.; Fineran, Peter C.; Mesarich, Carl H.; Templeton, Matthew D. (2020)Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the Pseudomonas syringae species complex.Environmental Microbiology22(12)5356-5372. DOI: 10.1111/1462-2920.15250

Culture events
Deposited:
Actioned by:
S. Visnovsky (Reference number 230611-9-SBV)
Date:
05 July 2012 (Verbatim: 5/7/2012)
Isolated:
Actioned by:
Robert K. Taylor (Reference number T10-04801-5)
Date:
24 November 2010 (Verbatim: 24/11/2010)
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice