Specimen Details

ICMP 18803 – Pseudomonas syringae pv. actinidifoliorum Cunty et al.

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 18803

Culture type:

Bacterial Culture

Loan status:

Active

Database record added:

09 March 2011

Database record updated:

07 February 2024

Components

Primary component

Active identification

Determined name:

Pseudomonas syringae pv. actinidifoliorum Cunty et al.

Determiner:

B.S. Weir

Identification date:

2016-01-13 (Verbatim: 13 Jan 2016)

Preferred name:

Pseudomonas syringae pv. actinidifoliorum Cunty et al.

Division:

Pseudomonadota

Class:

Gammaproteobacteria

Order:

Pseudomonadales

Family:

Pseudomonadaceae

Identification type:

Determination

Associations:

isolated from Actinidia chinensis

Other identifications

Identification

Determined name:

Pseudomonas syringae pv. actinidiae

Determiner:

Identification date:

Preferred name:

Pseudomonas syringae pv. actinidiae Takikawa et al. 1989

Active:

Identification type:

Received as

Identification

Determined name:

Pseudomonas syringae pv. actinidiae Takikawa et al. 1989

Determiner:

R.K. Taylor

Identification date:

Preferred name:

Pseudomonas syringae pv. actinidiae Takikawa et al. 1989

Active:

Identification type:

Determination

Other components

Active identification

Determined name:

Actinidia chinensis

Determiner:

Identification date:

Preferred name:

Actinidia chinensis Planch.

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Ericales

Family:

Actinidiaceae

Vernacular name:

Kiwifruit Gold

Identification type:

Determination

Part affected:

Leaf

Present:

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Hastings

Georeferences:

Latitude and Longitude (WGS84): -39.65 176.833333

Verbatim locality:

Hastings

Verbatim collector:

Kiwifruit Vine Health

Standardised collector:

Kiwifruit Vine Health

Verbatim date:

Nov 2010

Start date:

2010-11

Country:

New Zealand

New Zealand Area Codes:

Hawkes Bay

Culture flags

Price Category:

Category 1

Culture notes

Characterised as:

Psa4 (Chapman et al. 2012) = Psa-LV. LOPAT 1a.
R. Taylor

Other Details:

Fluorescent on Kings B
M. Fletcher, 15/8/11

External links

GenBank:

JQ836599 - putative magnesium transporter CorA-like superfamily protein

PRJNA167409 - Pseudomonas syringae pv. actinidifoliorum ICMP 18803 Genome sequencing

AOKK00000000 - genomic DNA

[TRUNCATED] CP081457 - dnaA, dnaN, recF, gyrB, gmhB, glyS, glyQ, trkA, rsmB, fmt, def, dprA, hemF, aroE, betC, trpA, trpB, prlC, hemC, argH, rep, alr, dadA, rpmG, rpmB, radC, coaBC, dut, argB, pyrE, crc, rph, gmk, rpoZ, spoT, exbB, exbD, recG, hopY1d_1, lysA, glnK, hopBO1c_1, xerC, dapF, cyaY, rnk, gltP, rimK, hslO, argE, gabT, yejB, iaaL, typA, thiI, glnA, glnL, ntrC, mgrA, polA, yihA, algB, ompR, gshA, argA, gcvH, gcvT, cysW, cysT, oscA, gabD, ligB, metK, tkt, epd, fba, dgcA, dgcB, gbcA, gbcB, rlmJ, msrA, mdtD, mutM, coaD, rsmD, ftsY, ftsE, ftsX, rpoH, mtgA, thiS, trmB, betI, betB, betA, fdhA, purU, choV, choW, hopAS1b_1, rarD, bioB, bioF, bioC, bioD, pqqE, pqqD, pqqC, pqqB, pqqA, pqqF, rpoD, dnaG, rpsU, tsaD, plsY, folB, folK, glpE, apaG, rsmA, pdxA, rpe, trpE, trpD, trpC, crp, speD, coq7, hemJ, argC, erpA, tyrS, rrf, secE, nusG, rplK, rplA, rplJ, rplL, rpoB, rpoC, rpsL, rpsG, fusA, tuf, rpsJ, rplC, rplD, rplW, rplB, rpsS, rplV, rpsC, rplP, rpmC, rpsQ, rplN, rplX, rplE, rpsN, rpsH, rplF, rplR, rpsE, rpmD, rplO, secY, rpmJ, rpsM, rpsK, rpsD, rpoA, rplQ, bfr, uvrA, ugpC, trxA, nrdR, ribD, ribE, nusB, thiL, ribA, dxs, metC, yghU, ppa, eutC, mpl, ubiX, cueR, fecE, fecC, recC, recB, recD, vgrG, mmsB, ggt, phnE, selD, mnmH, rplU, rpmA, cgtA, proB, rpsT, murJ, ribF, ileS, lspA, ispH, pilV, thiO, rluD, pgeF, clpB, hopW1f_1, hopR1b_1, shcAG, hopAG1d_1, hopAH1k_1, hopAI1e_1, cheD, tnpB, yacG, coaE, pilB, nadC, ampD, ampE, cra, ptsP, pfkB, pgi, panC, panB, gluQRS, dksA, sfsA, deoC, mrcB, ilvN, ilvC, pssA, msrP, msrQ, rimI, can, yhjQ, bcsA, bcsZ, aroA, vapB, gmd, rfbA, rfbD, cysQ, cysC, hopF1b_1, hopAR1e_1, avrPto1r_1, hopAF1b_1, hopAB1e_1, ychF, pth, ispE, lolB, hemA, prfA, prmC, murI, phrB, hemH, upp, mqo, rutF, rutD, rutC, rutB, rutA, rutR, pta, cysZ, trxB, folX, folE, folM, wecB, ltrA, algG, algK, alg8, yaaA, moaC, moaD, moaE, rhlB, yejK, rlmF, lptF, lptG, gcvP, gap, edd, zwf, pgl, cyoA, cyoB, cyoD, cyoE, hpxZ, atzF, hopN1a_1, hopAA1d_1, hopM1f_1, avrE1d_1, hrpR, hrpS, hrpA, hrpZ1, sctI, sctJ, sctL, sctC, hrpV, sctU, sctT, sctS, sctR, hrcN, sctD, sctV, sctW, hrpL, hrpK1, hopX1d_1, queA, tgt, yajC, secD, secF, suhB, trmJ, cysE, iscR, iscU, iscA, hscB, hscA, fdx, iscX, ndk, rlmN, pilW, ispG, hisS, bamB, der, leuA, xseA, guaB, guaA, norR, hmpA, tadA, mltF, purL, purT, ccsA, ffh, rpsP, rimM, trmD, rplS, xerD, dsbC, thrC, recJ, prfB, lysS, ppc, adk, tsaB, plsB, dapE, tcdA, dapD, dapC, map, rpsB, tsf, pyrH, frr, uppS, ispC, rseP, bamA, lpxD, fabZ, lpxA, lpxB, rnhB, dnaE, accA, tilS, kdsA, eno, ftsB, ispD, fghA, ispF, truD, surE, rpoS, mutS, recA, recX, fpr, tsaA, rimO, mprF, dinB, aspS, ruvC, ruvA, ruvB, ybgC, tolQ, tolR, tolA, tolB, pal, ybgF, queE, queC, nadA, dapA, bamC, rnd, cysK, rdgC, minE, minD, minC, lpxK, kdsB, murB, rne, rluC, sppA, rpmF, plsX, fabD, fabG, acpP, fabF, pabC, mltG, tmk, truA, accD, folC, purF, ilvA, pepN, mntP, acnB, lpxH, cysS, folD, tig, clpP, clpX, lon, fabI, gloB, rnhA, dnaQ, alc, uraD, puuE, uraH, guaD, xdhC, xdhB, xdhA, smc, zipA, ligA, ffs, hopAZ1a_1, dnaX, recR, ccmA, ccmB, ccmD, ccmE, ccmI, antA, antB, antC, catC, catA, efeO, efeB, ada, katB, tvrR, csrA, metA, iaaM, glcF, glcE, glcD, maiA, hppD, hmgA, fahA, yegS, fadB, fadA, topA, lexA, psrA, nagZ, clsB, iolC, iolE, iolB, iolD, ssuD, ligD, ssuE, rfaH, rhtA, queD, nuoN, nuoM, nuoL, nuoK, nuoJ, nuoI, nuoH, nuoG, nuoF, nuoE, nuoC, aceA, purB, hflD, mnmA, cspD, clpS, clpA, infA, aat, ftsK, lolA, crcB, serS, cysG, tusB, tusC, tusD, solA, gspE, gspF, gspG, gspD, pncA, hopAH1a_1, hopAH1i_1, gudD, pstS, pstC, pstA, pstB, nirD, nirB, hopW1c_1, cobM, cobW, cobN, pnuC, pcaD, glgX, malQ, treZ, glgA, gnd, alkB, galU, gorA, ahpC, ahpF, gloA, hopAB1i_1, pgm, uvrY, uvrC, pgsA, xylG, xylF, xylA, baeS, modC, modB, modA, sbnA, ftrA, treS, mhpT, nac, accC, pxpB, arnF, arnT, arnA, arnC, arnB, acnA, macA, rpiB, dhaL, tssJ, tssG, tssF, tssA, tssH, tssL, tssK, tssC, tssB, imuA, glgB, tpx, xthA, nfuA, metH, sohB, nudC, cobF, xylB, nhaR, pbpG, sctQ, dctA, araH, araG, ybtE, sfnG, glnT, folE2, phnP, phnN, phnL, phnK, phnH, phnG, phnF, phnD, phnC, tssM, icmH, tssE, moaA, poxB, mrdA, glsB, urtA, urtB, urtC, urtD, urtE, ureE, ureC, ureG, istA, istB, zorA, ihfA, pheT, pheS, rplT, rpmI, infC, thrS, rbsD, rbsK, moaB, mobA, pcaC, pcaG, pcaH, pcaQ, dacB, rlmKL, cobA, sigX, rraA, ppsA, prpF, acnD, prpC, prpB, pabB, thrH, cysB, oprI, greB, kdpC, kdpB, kdpA, kdpF, sixA, fabA, fabB, htpG, brnQ, sucD, sucC, lpdA, odhB, sdhA, sdhD, sdhC, gltA, dgoD, asd, leuB, leuD, leuC, gltX, uvrB, pvdM, dusA, tal, queF, lolD, sthA, mfd, hopE1a_1, speE, mtnC, aroC, prmB, pyrF, eat, pdxB, tusA, rlmM, ccoN, ccoO, ccoP, ccoG, cadA, ccoS, hemN, fnr, motD, fliA, fleN, flhF, flhA, flhB, fliR, fliP, fliO, fliN, fliM, fliL, fliJ, fliI, fliH, fliG, fliF, fliE, fleQ, fliT, fliS, fliD, flgK, flgJ, flgH, flgG, flgE, flgD, flgC, flgB, cynS, cynR, cheR, flgA, flgM, vioA, ppnN, pobA, mgtE, alaS, ltaE, astE, astB, astD, astA, aruF, argR, acs, phhA, arfB, rluB, scpB, msrB, htpX, earP, ihfB, rpsA, cmk, pheA, serC, gyrA,

Literature:

Chapman, J. R.; Taylor, R. K.; Weir, B. S.; Romberg, M. K.; Vanneste, J. L.; Luck, J.; Alexander, B. J. R. (2012)Phylogenetic Relationships Among Global Populations of Pseudomonas syringae pv. actinidiae.Phytopathology®102(11)1034-1044. DOI: 10.1094/PHYTO-03-12-0064-R

Jayaraman, Jay; Jones, William T.; Harvey, Dawn; Hemara, Lauren M.; McCann, Honour C.; Yoon, Minsoo; Warring, Suzanne L.; Fineran, Peter C.; Mesarich, Carl H.; Templeton, Matthew D. (2020)Variation at the common polysaccharide antigen locus drives lipopolysaccharide diversity within the Pseudomonas syringae species complex.Environmental Microbiology22(12)5356-5372. DOI: 10.1111/1462-2920.15250

González, Ana J.; Díaz, David; Ciordia, Marta; Landeras, Elena (2024)Occurrence of Pseudomonas syringae pvs. actinidiae, actinidifoliorum and Other P. syringae Strains on Kiwifruit in Northern Spain.Life14(2)208-. DOI: 10.3390/life14020208

Culture events

Isolated:

Actioned by:

Megan Romberg (Reference number T10-05163)

Date:

17 November 2010 (Verbatim: 17 Nov 2010)

Deposited:

Actioned by:

Robert K. Taylor (Reference number T10-05163)

Date:

07 March 2011 (Verbatim: 07 Mar 2011)

Duplicates

French Collection for Plant-associated Bacteria: CFBP 7901

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice