Systematics Collections Data

ICMP 15444 – Colletotrichum boninense Moriwaki, Toy. Sato & Tsukib.

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 15444
Culture type:
Fungal Culture
Database record added:
17 March 2004
Database record updated:
03 November 2021
Components
Primary component
Active identification
Determined name:
Colletotrichum boninense Moriwaki, Toy. Sato & Tsukib.
Determiner:
B.S. Weir
Identification date:
2012 (Verbatim: 2012)
Preferred name:
Colletotrichum boninense Moriwaki, Toy. Sato & Tsukib.
Division:
Ascomycota
Class:
Sordariomycetes
Order:
Glomerellales
Family:
Glomerellaceae
Identification type:
Determination
Associations:
isolated from Cyphomandra betacea
Other identifications
Identification
Determined name:
Colletotrichum gloeosporioides (Penz.) Penz. & Sacc.
Determiner:
Identification date:
Preferred name:
Colletotrichum gloeosporioides (Penz.) Penz. & Sacc.
Active:
no
Identification type:
Determination
Identification
Determined name:
Colletotrichum gloeosporioides
Determiner:
Identification date:
Preferred name:
Colletotrichum gloeosporioides (Penz.) Penz. & Sacc.
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Cyphomandra betacea
Determiner:
Identification date:
Preferred name:
Solanum betaceum Cav.
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Solanales
Family:
Solanaceae
Identification type:
Determination
Part affected:
Flowers
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Kaipara
Georeferences:
Latitude and Longitude (WGS84):  -36.387781  174.12682 
Verbatim locality:
Kaipara
Verbatim collector:
Verbatim date:
Country:
New Zealand
New Zealand Area Codes:
Northland
Culture flags
Price Category:
Category 1
Culture notes
Characterised as:
Identified by sequencing and morphology
B. Weir
External links
GenBank:

JQ005156 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

JQ005243 - GAPDH

JQ005417 - HIS3

JQ005504 - ACT

JQ005677 - CAL

JQ005330 - CHS1

JQ005590 - TUB2

MH865016 - genomic DNA

MH876452 - large subunit ribosomal RNA

Literature:

Vu, D.; Groenewald, M.; de Vries, M.; Gehrmann, T.; Stielow, B.; Eberhardt, U.; Al-Hatmi, A.; Groenewald, J.Z.; Cardinali, G.; Houbraken, J.; Boekhout, T.; Crous, P.W.; Robert, V.; Verkley, G.J.M. (2019)Large-scale generation and analysis of filamentous fungal DNA barcodes boosts coverage for kingdom fungi and reveals thresholds for fungal species and higher taxon delimitation.Studies in Mycology92(1)135-154. DOI: 10.1016/j.simyco.2018.05.001

Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Johnston, P.R.; Weir, B.S.; Tan, Y.P.; Shivas, R.G.; Crous, P.W. (2012)The Colletotrichum boninense species complex.Studies in Mycology731-36. DOI: 10.3114/sim0002

Culture events
Isolated:
Date:
01 February 2004 (Verbatim: 01 Feb 2004)
Deposited:
Actioned by:
Mike A. Manning (Reference number MM316)
Date:
15 March 2004 (Verbatim: 15 Mar 2004)
Duplicates
Westerdijk Fungal Biodiversity Institute: CBS 128549
Direction:
Duplicate
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice