Specimen Details

ICMP 12927 – Colletotrichum nigrum Ellis & Halst.

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 12927

Culture type:

Fungal Culture

Database record added:

25 January 2002

Database record updated:

08 August 2025

Components

Primary component

Active identification

Determined name:

Colletotrichum nigrum Ellis & Halst. 1891

Determiner:

F. Liu

Identification date:

2013 (Verbatim: 2013)

Preferred name:

Colletotrichum nigrum Ellis & Halst.

Division:

Ascomycota

Class:

Sordariomycetes

Order:

Glomerellales

Family:

Glomerellaceae

Identification type:

Determination

Reference text:

Liu et al., Mycologia 105: 844-860, 2013

Associations:

isolated from Capsicum annuum L.

Other identifications

Identification

Determined name:

Colletotrichum coccodes

Determiner:

Identification date:

Preferred name:

Colletotrichum coccodes (Wallr.) S. Hughes

Active:

no

Identification type:

Received as

Identification

Determined name:

Colletotrichum coccodes (Wallr.) S. Hughes

Determiner:

Identification date:

Preferred name:

Colletotrichum coccodes (Wallr.) S. Hughes

Active:

no

Identification type:

Determination

Other components

Active identification

Determined name:

Capsicum annuum L.

Determiner:

Identification date:

Preferred name:

Capsicum annuum L.

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Solanales

Family:

Solanaceae

Vernacular name:

Sweet pepper

Identification type:

Determination

Part affected:

Fruit rot

Present:

no

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Opotiki

Georeferences:

Latitude and Longitude (WGS84): -38.01 177.286

Verbatim locality:

Main Opotiki highway, Gisborne

Verbatim collector:

P.R. Johnston

Standardised collector:

Peter R. Johnston

Verbatim date:

6 March 1990

Start date:

1990-03-06

Country:

New Zealand

New Zealand Area Codes:

Bay of Plenty

Culture flags

Price Category:

Category 1

Culture notes

Characterised as:

Identity confirmed by sequencing
P.R. Johnston, 1997

External links

GenBank:

JX546796 - histone H3

JX546747 - GAPDH

JX546843 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

JX546698 - CHS1

JX546890 - tub2

U79701 - 28S ribosomal RNA

Literature:

Liu, Fang; Cai, Lei; Crous, Pedro W.; Damm, Ulrike (2013)Circumscription of the anthracnose pathogens Colletotrichum lindemuthianum and C. nigrum.Mycologia105(4)844-860. DOI: 10.3852/12-315

Johnston, Peter R.; Jones, Derek (1997)Relationships amongColletotrichumisolates from fruit-rots assessed using rDNA sequences.Mycologia89(3)420-430. DOI: 10.1080/00275514.1997.12026801

Culture events

Isolated:

Date:

06 March 1990 (Verbatim: 06 Mar 1990)

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Peter R. Johnston (Reference number C1147-2)

Date:

01 August 1996 (Verbatim: 01 Aug 1996)

Duplicates

Westerdijk Fungal Biodiversity Institute: CBS 128507

Direction:

Duplicate

Permissions

Project permits

Project title:

Biological specimens housed at Manaaki Whenua: Te rohe o Whakatōhea

Reference:

Local Contexts - Whakatohea

BC Provenance (BC P) | Nā wai/ Nō hea

BC Research Use (BC R) | Rangahau

BC Open to Collaboration (BC CB) | Kotahitanga

BC Open to Commercialization (BC OC) | Umanga

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice