Specimen Details

ICMP 12923 – Colletotrichum fioriniae (Marcelino & Gouli) Pennycook 2017

Data provider:

International Collection Of Microorganisms

Barcode:

ICMP 12923

Culture type:

Fungal Culture

Database record added:

25 January 2002

Database record updated:

31 October 2024

Components

Primary component

Active identification

Determined name:

Colletotrichum fioriniae (J.A.P. Marcelino & S. Gouli) R.G. Shivas & Y.P. Tan 2009

Determiner:

P.R. Johnston

Identification date:

2012 (Verbatim: 2012/0/0)

Preferred name:

Colletotrichum fioriniae (Marcelino & Gouli) Pennycook 2017

Division:

Ascomycota

Class:

Sordariomycetes

Order:

Glomerellales

Family:

Glomerellaceae

Identification type:

Determination

Note:

DNA sequence match

Associations:

isolated from Malus X domestica Borkh.

Other identifications

Identification

Determined name:

Colletotrichum "acutatum Group A" P.R. Johnst.

Determiner:

P.R. Johnston

Identification date:

1997 (Verbatim: 1997)

Preferred name:

Colletotrichum fioriniae R.G. Shivas & Y.P. Tan

Active:

Identification type:

Determination

Identification

Determined name:

Colletotrichum acutatum J.H. Simmonds

Determiner:

Identification date:

Preferred name:

Colletotrichum acutatum J.H. Simmonds

Active:

Identification type:

Determination

Identification

Determined name:

Colletotrichum acutatum

Determiner:

Identification date:

Preferred name:

Colletotrichum acutatum J.H. Simmonds

Active:

Identification type:

Received as

Other components

Active identification

Determined name:

Malus X domestica Borkh.

Determiner:

Identification date:

Preferred name:

Malus domestica

Division:

Tracheophyta

Class:

Magnoliopsida

Order:

Rosales

Family:

Rosaceae

Vernacular name:

Apple

Identification type:

Determination

Part affected:

Bitter rot of fruit

Present:

Collection events

Primary collection event

Collection event type:

Field

Standard locality

Location:

Auckland

Georeferences:

Latitude and Longitude (WGS84): -36.840556 174.74

Verbatim locality:

Auckland

Verbatim collector:

P.R. Johnston

Standardised collector:

Peter R. Johnston

Verbatim date:

Aug 1987

Start date:

1987-08

Country:

New Zealand

New Zealand Area Codes:

Auckland

Culture flags

Price Category:

Category 1

Culture notes

Other Details:

C. acutatum group A (Johnston and Jones)

External links

GenBank:

JQ949956 - TUB2

JQ948966 - CHS-1

JN985523 - RPB2

JQ948305 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

JN943477 - 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

JN985202 - RPB1

JN993278 - MCM7

MH876456 - large subunit ribosomal RNA

U79694 - 28S ribosomal RNA

Literature:

Damm, U.; Cannon, P.F.; Woudenberg, J.H.C.; Crous, P.W. (2012)The Colletotrichum acutatum species complex.Studies in Mycology7337-113. DOI: 10.3114/sim0010

Souleyre, Edwige J. F.; Bowen, Joanna K.; Matich, Adam J.; Tomes, Sumathi; Chen, Xiuyin; Hunt, Martin B.; Wang, Mindy Y.; Ileperuma, Nadeesha R.; Richards, Kate; Rowan, Daryl D.; Chagné, David; Atkinson, Ross G. (2019)Genetic control of α‐farnesene production in apple fruit and its role in fungal pathogenesis.The Plant Journal100(6)1148-1162. DOI: 10.1111/tpj.14504

Johnston, Peter R.; Jones, Derek (1997)Relationships amongColletotrichumisolates from fruit-rots assessed using rDNA sequences.Mycologia89(3)420-430. DOI: 10.1080/00275514.1997.12026801

Culture events

Isolated:

Date:

01 August 1987 (Verbatim: 01 Aug 1987)

Deposited:

Note:

Derived from earliest batch date

Actioned by:

Peter R. Johnston (Reference number 839-1)

Date:

01 September 1996 (Verbatim: 01 Sep 1996)

Duplicates

Westerdijk Fungal Biodiversity Institute: CBS 128555

Direction:

Duplicate

Permissions

Project permits

Project title:

Local Contexts - ICMP Culture Collection

Reference:

ICMP Collection - Local Contexts

Biocultural (BC) Notice