Systematics Collections Data

ICMP 12297 – Boeremia exigua (Desm.) Aveskamp, Gruyter & Verkley

Data provider:
International Collection Of Microorganisms
Barcode:
ICMP 12297
Culture type:
Fungal Culture
Database record added:
25 January 2002
Database record updated:
18 December 2015
Components
Primary component
Active identification
Determined name:
Boeremia exigua (Desm.) Aveskamp, Gruyter & Verkley
Determiner:
P.R. Johnston
Identification date:
2015-12 (Verbatim: Dec 2015)
Preferred name:
Boeremia exigua (Desm.) Aveskamp, Gruyter & Verkley
Division:
Ascomycota
Class:
Dothideomycetes
Order:
Pleosporales
Family:
Didymellaceae
Identification type:
Determination
Note:
Redet based on DNA sequences
Associations:
isolated from Rubus ursinus Cham. & Schlecht. var. loganobaccus (L.H. Bailey) L.H. Bailey
Other identifications
Identification
Determined name:
Phoma Sacc.
Determiner:
Identification date:
Preferred name:
Phoma Sacc. 1880
Active:
no
Identification type:
Determination
Identification
Determined name:
Phoma sp.
Determiner:
Identification date:
Preferred name:
Phoma Sacc. 1880
Active:
no
Identification type:
Received as
Other components
Active identification
Determined name:
Rubus ursinus Cham. & Schlecht. var. loganobaccus (L.H. Bailey) L.H. Bailey
Determiner:
Identification date:
Preferred name:
Rubus
Division:
Tracheophyta
Class:
Magnoliopsida
Order:
Rosales
Family:
Rosaceae
Vernacular name:
boysenberry
Identification type:
Determination
Part affected:
cane cankers
Present:
no
Collection events
Primary collection event
Collection event type:
Field
Standard locality
Location:
Nelson
Georeferences:
Latitude and Longitude (WGS84):  -41.270833  173.283889 
Verbatim locality:
Nelson
Verbatim collector:
Verbatim date:
Country:
New Zealand
New Zealand Area Codes:
Nelson
Culture flags
Price Category:
Category 1
Culture notes
Other Details:
possibly Didymella applana
External links
GenBank:

KT309448 - tub2

KT309198 - act

KT309860 - 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, internal transcribed spacer 1, internal transcribed spacer 2

KT309665 - 28S ribosomal RNA

Literature:

Johnston, P. R.; Park, D.; Ho, W. W. H.; Alexander, B. J. R. (2017)Genetic validation of historical plant pathology records - a case study based on the fungal genus Phoma from the ICMP culture collection.Plant Pathology66(9)1424-1431. DOI: 10.1111/ppa.12728

Culture events
Deposited:
Note:
Derived from earliest batch date
Actioned by:
K. Knight (Reference number 95/1306)
Date:
01 July 1995 (Verbatim: 01 Jul 1995)
Permissions
Project permits
Project title:
Local Contexts - ICMP Culture Collection
Reference:
ICMP Collection - Local Contexts
Biocultural (BC) Notice